Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq35982 86.0 4e-12 >seq35982 Length=112201 Score = 86.0 bits (94), Expect = 4e-12 Identities = 160/231 (69%), Gaps = 8/231 (3%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTT--TCTTTTTGTATATTATAATCGG 39550 || |||| ||| | || |||||||| ||||| | ||||| || || || || || | Sbjct 104646 CCTCCTCTCAATCTCAAGACCAAATG--AAGTGTTGACTCTTTCTGAATGTTGTAGTCTG 104589 Query 39551 CCAAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGG 39610 ||| || |||| || |||||||| || |||| || | ||| |||||||| | | Sbjct 104588 ACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGAG 104529 Query 39611 GTACGCCTTCTTTGTCGCATATTTTTTGTTTAA--TCGTCGCTACTGTGTCTGCGCTTTC 39668 | | |||||||| || || || ||| | | ||| || ||||| | ||| Sbjct 104528 GAATACCTTCTTTATCTTGGATCTTAGCTTTTACGTTTTCGATA--GTGTCAGATGGTTC 104471 Query 39669 CACGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| |||| |||||||||||| || || |||||||| || || || ||||| Sbjct 104470 CACTTCCAGAGTAATTGTTTTTCCTGTCAAAGTTTTGACAAAAATTTGCAT 104420 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347053890208109