Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq37108 104 3e-17 seq37249 93.3 6e-14 >seq37108 Length=42392 Score = 104 bits (114), Expect = 3e-17 Identities = 78/92 (85%), Gaps = 0/92 (0%) Strand=Plus/Plus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||||||||| | ||||||||||||||| || ||| |||||||| | ||||| || || Sbjct 8416 ACCATAAGGAGATCTTGGATAGAAAGGTGTTGTTTCTTTCTGTGGAATTTCTTGTACTTT 8475 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAGA 48166 ||| | | |||||| |||||||||||||||| Sbjct 8476 TCCAAACATTTCACTAGTGGATGCTTGATAGA 8507 >seq37249 Length=27939 Score = 93.3 bits (102), Expect = 6e-14 Identities = 75/91 (82%), Gaps = 0/91 (0%) Strand=Plus/Minus Query 48075 ACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTT 48134 |||||||||||| | |||||||||||| || || ||| |||| ||| | ||||| || || Sbjct 91 ACCATAAGGAGATCTTGGATAGAAAGGCGTTGTTTCTTTCTGCGGAATTTCTTGTACTTT 32 Query 48135 ACCATAAAGTTCACTGGTGGATGCTTGATAG 48165 ||| | | |||||| ||||||||||||||| Sbjct 31 TCCAAACATTTCACTAGTGGATGCTTGATAG 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 664874051076360