Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq35982 158 2e-33 seq9175 156 8e-33 >seq35982 Length=112201 Score = 158 bits (174), Expect = 2e-33 Identities = 177/237 (75%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| || || |||||||||| | |||| ||| | ||| | |||||| || || Sbjct 104428 AATTTGCATTCCTCCTCTCAATCTTAAGACCAAATGAAGTGTTGACTCTTTCTGGATGTT 104369 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || || | | ||| ||||||||||| || ||||| || | | || || Sbjct 104368 GTAGTCTGACAATGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATAAGACGTTGCTG 104309 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| ||||| |||||||| || ||||||| |||| |||| ||||| || || Sbjct 104308 ATCTGGAGGAATTCCCTCTTTATCCTGGATTTTGGCCTTTACATTTTCGATAGTGTCTGA 104249 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 || || ||||| || || |||||||| ||||| || ||||| |||||||| ||||| Sbjct 104248 AGGTTCTACTTCAAGGGTGATAGTTTTCCCTGTCAGTGTTTTCACAAATATCTGCAT 104192 Score = 154 bits (170), Expect = 3e-32 Identities = 177/238 (74%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| |||||||||| | |||| ||| | ||| | |||||| ||| || Sbjct 104656 AATTTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGTGTTGACTCTTTCTGAATGTT 104597 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || || | | ||| ||||||||||| || ||||| || | | || || Sbjct 104596 GTAGTCTGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTG 104537 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| || || | ||||| ||| ||||| || || Sbjct 104536 ATCTGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTTACGTTTTCGATAGTGTCAGA 104477 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATT 193361 | || ||||| ||||| || ||||| ||||| | ||||| ||||| ||||||||| Sbjct 104476 TGGTTCCACTTCCAGAGTAATTGTTTTTCCTGTCAAAGTTTTGACAAAAATTTGCATT 104419 Score = 149 bits (164), Expect = 1e-30 Identities = 175/237 (74%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| |||||||||| | |||| ||| | ||| | |||||| || || Sbjct 104884 AATTTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGTGTGGACTCTTTCTGGATGTT 104825 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||||| || || || | | ||| ||||||||||| || ||||| || | | || || Sbjct 104824 GTAGTCCGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTG 104765 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| || |||| ||||| ||| ||||| || || Sbjct 104764 ATCTGGAGGAATACCTTCTTTATCTTGGATCTTGGCTTTTACGTTTTCGATAGTGTCTGA 104705 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || ||||| ||||| || || || ||||| || || |||||||| Sbjct 104704 TGGTTCCACTTCAAGTGTTATTGTTTTTCCAGTAAGTGTTTTGACGAAAATTTGCAT 104648 Score = 143 bits (158), Expect = 5e-29 Identities = 174/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| |||||||||| | |||| ||| | || | |||||| || || Sbjct 105112 AATTTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGCGTGGACTCTTTCTGGATGTT 105053 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 ||| || || || || | | ||| ||||||||||| || ||||| || | | || || Sbjct 105052 ATAATCCGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTG 104993 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| ||||| | ||||| ||| ||||| || || Sbjct 104992 ATCTGGAGGAATACCTTCTTTATCTTGAATTTTAGCTTTTACGTTTTCGATAGTGTCAGA 104933 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || ||||| ||||| || || || ||||| || || |||||||| Sbjct 104932 TGGTTCCACTTCAAGTGTTATTGTTTTTCCAGTAAGTGTTTTGACGAAAATTTGCAT 104876 Score = 140 bits (154), Expect = 6e-28 Identities = 173/237 (73%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 193124 AATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATT 193183 ||||| ||||| |||||||||| | |||| ||| | ||| | |||||| || || Sbjct 105340 AATTTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGTGTCGACTCTTTCTGGATGTT 105281 Query 193184 ATAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTG 193243 || || || || || | | ||| ||||||||||| || ||||| || | | || || Sbjct 105280 GTAATCTGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTG 105221 Query 193244 ATCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGA 193303 ||| ||||| || |||||||||||||| || || | ||||| ||| ||||| || || Sbjct 105220 ATCTGGAGGAATACCTTCTTTATCTTGGATCTTAGCTTTTACGTTTTCGATAGTGTCTGA 105161 Query 193304 AGACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || ||||| ||||| || || || ||||| || || |||||||| Sbjct 105160 TGGTTCCACTTCAAGTGTTATTGTTTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 105104 Score = 129 bits (142), Expect = 1e-24 Identities = 134/176 (76%), Gaps = 0/176 (0%) Strand=Plus/Minus Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| || ||||| | | ||| ||||||||||| || ||||| || | | || ||| Sbjct 105507 TAGTCTGACAACGTACGACCATCTTCTAATTGTTTCCCAGCAAAGATAAGACGTTGCTGA 105448 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || ||||| || |||||||||||||| ||||| | ||||| ||| ||||| || || Sbjct 105447 TCTGGAGGAATACCTTCTTTATCTTGAATTTTAGCTTTTACGTTTTCGATAGTGTCAGAT 105388 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | || ||||| || ||||| ||||| ||||| || ||||| || || |||||||| Sbjct 105387 GGTTCCACTTCAAGTGTTATTGTTTTTCCTGTAAGTGTTTTGACGAAAATTTGCAT 105332 Score = 89.7 bits (98), Expect = 9e-13 Identities = 120/167 (72%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 193134 CCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGAT 193193 || |||||||| || | || | ||| | || | |||||| || || ||||| || Sbjct 105904 CCTCCTCTCAAACGCAACACTAAATGAAGGGTTGACTCTTTCTGGATGTTGTAGTCTGAC 105845 Query 193194 AACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGT 193253 || || | | ||| ||||||||||| || ||||| || | | || ||||| ||||| Sbjct 105844 AATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGA 105785 Query 193254 ATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATC 193300 || |||||||||||||| ||||| | ||||| ||| ||||| || Sbjct 105784 ATACCTTCTTTATCTTGAATTTTAGCTTTTACGTTTTCGATAGTGTC 105738 >seq9175 Length=65522 Score = 156 bits (172), Expect = 8e-33 Identities = 176/236 (75%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| | || ||||| ||||| | ||| | ||||| |||||| Sbjct 22873 ATTTGCATACCTCCTCGGAGACGGAGTACAAGATGGAGTGTTGATTCTTTCTGAATATTG 22932 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| |||| |||||| ||| || | ||||||||||||||| || ||||||||||| Sbjct 22933 TAGTCAGATAGTGTTCTACCATCTTCAAGTTGTTTTCCGGCAAAGATCAATCTCTGTTGG 22992 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||| ||||| || || ||||| | ||| | ||| ||| ||||| || Sbjct 22993 TCTGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTATCTGAT 23052 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | ||||||||||| || || || || || || | ||||| || || |||||||| Sbjct 23053 GGTTCAACTTCTAGCGTGATGGTCTTGCCAGTCAATGTTTTGACGAAGATTTGCAT 23108 Score = 150 bits (166), Expect = 3e-31 Identities = 175/236 (74%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 193125 ATTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTA 193184 |||| ||||| |||| | || ||||| ||||| | ||| | ||||| ||| || Sbjct 23101 ATTTGCATACCTCCTCGGAGACGGAGTACAAGATGGAGTGTTGATTCTTTCTGAATGTTG 23160 Query 193185 TAGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGA 193244 ||||| |||| |||||| ||| || | ||||||||| ||||| || ||||||||||| Sbjct 23161 TAGTCAGATAGTGTTCTACCATCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGG 23220 Query 193245 TCAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAA 193304 || || || ||||| ||||| || || ||||| | ||| | ||| ||| ||||| || Sbjct 23221 TCTGGTGGAATTCCCTCTTTGTCCTGGATTTTAGCTTTGACATTCTCAATTGTATCTGAT 23280 Query 193305 GACTCAACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 | |||||||||||||| || || || || || | ||||| || || |||||||| Sbjct 23281 GGTTCAACTTCTAGAGTGATGGTCTTGCCAGTCAAAGTTTTGACGAAGATTTGCAT 23336 Score = 149 bits (164), Expect = 1e-30 Identities = 159/210 (76%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 193151 TACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGATAACGTTCTAGAATCGTC 193210 ||| | ||| | ||| | ||||| ||| || |||||||| | |||||| ||| || Sbjct 22671 TACTAAATGGAGTGTGGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCTACCATCTTC 22730 Query 193211 TAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGGTATTCCTTCTTTATCTTG 193270 | ||||||||| ||||| || ||||||||||| || || || ||||| ||||| || || Sbjct 22731 AAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCTGGTGGAATTCCCTCTTTGTCCTG 22790 Query 193271 TATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAACTTCTAGAGTTATAGTTTT 193330 ||||| | ||| | |||| ||| ||||| || | |||||||||||||| || || || Sbjct 22791 GATTTTAGCTTTGACATTTTCAATTGTATCTGATGGTTCAACTTCTAGAGTGATGGTCTT 22850 Query 193331 ACCTGTTAGCGTTTTTACAAATATTTGCAT 193360 ||| || | ||||| ||||| |||||||| Sbjct 22851 ACCAGTCAAAGTTTTGACAAAGATTTGCAT 22880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898815775905360