Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq66969 113 1e-19 >seq66969 Length=194959 Score = 113 bits (124), Expect = 1e-19 Identities = 157/219 (72%), Gaps = 6/219 (3%) Strand=Plus/Minus Query 110757 TTTGCTATCTATCTCGAACCTTGGCATTCAGATATATTTGAATTCTTAGAACTTCGTAAA 110816 |||||||| || || || ||||||||| | ||||||||||| ||| | || | |||| Sbjct 45585 TTTGCTATGTACCTGGAGCCTTGGCATGCTGATATATTTGATTTCCTTGA---TTGTAAG 45529 Query 110817 AATCA---AGGATTTGAAGAACAAAGAGCACGTGATTTATTTTATGCAATGTGGATTTCA 110873 || | |||| ||||| | ||||| | ||| |||| ||||| ||||||||| || Sbjct 45528 AAGAACACAGGAAAAGAAGAGAACAGAGCTAGGGATCTATTCTATGCCATGTGGATTCCA 45469 Query 110874 GATTTATTCATGAAACGTGTTCAAGAAAATGGCATGTGGTCTCTTATGTGTCCTCATCGT 110933 || || || ||||| ||||| || ||||| |||| |||| |||||||| ||| Sbjct 45468 GACTTGTTTATGAAGCGTGTAGAAAGCAATGGAGAGTGGACTCTGATGTGTCCACATGAA 45409 Query 110934 TCTCCTGGTCTATCTGATGTATATGGAAAAGAGTTTGAA 110972 | ||||||| || ||| | || ||||||||||| Sbjct 45408 TGTCCTGGTTTACAAGATTGTTGGGGGGAAGAGTTTGAA 45370 Score = 102 bits (112), Expect = 2e-16 Identities = 122/163 (75%), Gaps = 2/163 (1%) Strand=Plus/Minus Query 110988 TATGAAAAAGAAGGCAAGTTT-CGCAAACAAATTCCAGCTCAAGAACTTTGGTTCAAAAT 111046 || || |||||||| | || |||||| |||| ||||||| | || |||| | || Sbjct 44669 TACGAGAAAGAAGG-ACGTGGACGCAAAACAATTAAAGCTCAACAGCTATGGTACTCCAT 44611 Query 111047 CCTTGAATCACAAGTTGAAACTGGAACTCCTTATATTTTGTATAAAGATCATATTAATCG 111106 | | || ||||| ||||||||| ||||||||||| ||||| ||||| || ||| || Sbjct 44610 CATAGAGGCACAAACTGAAACTGGTACTCCTTATATGTTGTACAAAGACCACTGTAACCG 44551 Query 111107 CAAATCTAATCAAATGAATTTAGGAACAATTAAGTCTAGTAAT 111149 ||||||||| || ||| ||||||| ||||| | ||||||| Sbjct 44550 CAAATCTAACCAGCAAAATCTAGGAACCATTAAATGTAGTAAT 44508 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1185678840053653