Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq9175 82.4 7e-11 >seq9175 Length=65522 Score = 82.4 bits (90), Expect = 7e-11 Identities = 147/215 (68%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 || || || ||||| || ||| ||||| || || || || |||| ||||||| | Sbjct 22666 CGCAATACTAAATGGAGTGTGGATTCTTTCTGAATGTTGTAGTCGGACAGTGTTCTACCA 22725 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || ||||| ||||| || ||||| || | | ||| ||||| | || | | ||||||| Sbjct 22726 TCTTCAAGTTGTTTTCCAGCAAAGATCAATCTCTGTTGGTCTGGTGGAATTCCCTCTTTG 22785 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 ||| |||||| ||||| | | | ||||| | || || || | ||||| Sbjct 22786 TCCTGGATTTTAGCTTTGACATTTTCAATTGTATCTGATGGTTCAACTTCTAGAGTGATG 22845 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | || || |||| ||||| |||||||||||||| Sbjct 22846 GTCTTACCAGTCAAAGTTTTGACAAAGATTTGCAT 22880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429155203857149