Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_031465.1 Length=360610 Score E Sequences producing significant alignments: (Bits) Value seq35982 120 7e-22 >seq35982 Length=112201 Score = 120 bits (132), Expect = 7e-22 Identities = 156/216 (72%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | |||||| || |||||||| ||||||||||| || | || || | || Sbjct 104407 TCTTAAGACCAAATGAAGTGTTGACTCTTTCTGGATGTTGTAGTCTGACAATGTACGACC 104348 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || |||||||| | ||||| || | | ||||| || || Sbjct 104347 ATCTTCTAATTGTTTGCCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATTCCCTCTTT 104288 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 || || ||||| || ||| | || | |||||||| ||||||||||| || || Sbjct 104287 ATCCTGGATTTTGGCCTTTACATTTTCGATAGTGTCTGAAGGTTCTACTTCAAGGGTGAT 104228 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 |||||| || || || || ||||| || | |||||| Sbjct 104227 AGTTTTCCCTGTCAGTGTTTTCACAAATATCTGCAT 104192 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | |||||| || |||||||| |||||||| ||||| | || || | || Sbjct 105091 TCTCAAGACCAAATGAAGCGTGGACTCTTTCTGGATGTTATAATCCGACAATGTACGACC 105032 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || |||||||| | ||||| || | | || ||||| || Sbjct 105031 ATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATACCTTCTTT 104972 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||||||||| ||| || | || | |||| || || |||||||| || || Sbjct 104971 ATCTTGAATTTTAGCTTTTACGTTTTCGATAGTGTCAGATGGTTCCACTTCAAGTGTTAT 104912 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || ||||| | ||||| Sbjct 104911 TGTTTTTCCAGTAAGTGTTTTGACGAAAATTTGCAT 104876 Score = 105 bits (116), Expect = 2e-17 Identities = 153/216 (71%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | |||||| || |||||||| |||||||||||||| | || || | || Sbjct 105319 TCTCAAGACCAAATGAAGTGTCGACTCTTTCTGGATGTTGTAATCTGACAATGTACGACC 105260 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || |||||||| | ||||| || | | || ||||| || Sbjct 105259 ATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATACCTTCTTT 105200 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || ||| || | || | ||||||| || |||||||| || || Sbjct 105199 ATCTTGGATCTTAGCTTTTACGTTTTCGATAGTGTCTGATGGTTCCACTTCAAGTGTTAT 105140 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || ||||| | ||||| Sbjct 105139 TGTTTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 105104 Score = 102 bits (112), Expect = 2e-16 Identities = 152/216 (70%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 151889 TCTGAGGACAAGATGAAGAGTAGACTCTTTTTGGATGTTGTAATCGGCTAAAGTTCTCCC 151948 ||| | ||| | |||||| || |||||||| ||||||||||| || | || || | || Sbjct 104863 TCTCAAGACCAAATGAAGTGTGGACTCTTTCTGGATGTTGTAGTCCGACAATGTACGACC 104804 Query 151949 ATCTTCTAGGCTTTTCCCGGCGAAGATAAGCCTCTGCTGGTCCGCCGAGATTCCTTCCTT 152008 |||||||| ||| || || |||||||| | ||||| || | | || ||||| || Sbjct 104803 ATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATCTGGAGGAATACCTTCTTT 104744 Query 152009 TTCTTGAATTTTTTGTTTGACAGTCTCTACGCTGTCTGAACTCTCTACTTCAAGAGTAAT 152068 ||||| || || ||| || | || | ||||||| || |||||||| || || Sbjct 104743 ATCTTGGATCTTGGCTTTTACGTTTTCGATAGTGTCTGATGGTTCCACTTCAAGTGTTAT 104684 Query 152069 AGTTTTGCCCGTGAGAGTCTTCACGAAGACCTGCAT 152104 ||||| || || || || || ||||| | ||||| Sbjct 104683 TGTTTTTCCAGTAAGTGTTTTGACGAAAATTTGCAT 104648 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1152718362806483