Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Modiolus_20philippinarum_20[genbank_20GCA_5F002080025.1_202017-04- 05] 74,573 sequences; 2,629,556,424 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq35982 111 1e-19 >seq35982 Length=112201 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||||| ||| ||| || ||||||||||| Sbjct 104881 TTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGTGTGGACTCTTTCTGGATGTTGTA 104822 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | || | || || | || || || |||||||| | ||| |||||||| Sbjct 104821 GTCCGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATC 104762 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | |||||| || || ||||| |||| | | || | || ||||| | | Sbjct 104761 TGGAGGAATACCTTCTTTATCTTGGATCTT-GGCTTTTACGTTTTCGATAGTGTCTGATG 104703 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | || || || ||||| || || || || ||||| |||||||| Sbjct 104702 GTTCCACTTCAAGTGTTATTGTTTTTCCAGTAAGTGTTTTGACGAAAATTTGCAT 104648 Score = 111 bits (122), Expect = 1e-19 Identities = 167/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || ||| || ||||||| |||||| |||| ||||| || ||| || ||||||||||| Sbjct 105337 TTGCATACCTCCTCTCAATCTCAAGACCAAATGAAGTGTCGACTCTTTCTGGATGTTGTA 105278 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 ||| | | | || | || || | || || || |||||||| | ||| |||||||| Sbjct 105277 ATCTGACAATGTACGACCATCTTCTAATTGTTTACCAGCAAAGATAAGACGTTGCTGATC 105218 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATG-TTCCTATGGTGTCGGCGG 44282 || ||| | |||||| || || ||||| |||| | | || | || ||||| | | Sbjct 105217 TGGAGGAATACCTTCTTTATCTTGGATCTT-AGCTTTTACGTTTTCGATAGTGTCTGATG 105159 Query 44283 ATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 |||||| || | || || || ||||| || || || || ||||| |||||||| Sbjct 105158 GTTCCACTTCAAGTGTTATTGTTTTTCCGGTAAGTGTTTTGACGAAAATTTGCAT 105104 Score = 84.2 bits (92), Expect = 2e-11 Identities = 159/234 (68%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 44104 TTTCATTCCCCCTCTCAGTCTCAACACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTA 44163 || |||||| ||||||| ||| || |||| ||||| || ||| || ||||||||||| Sbjct 104425 TTGCATTCCTCCTCTCAATCTTAAGACCAAATGAAGTGTTGACTCTTTCTGGATGTTGTA 104366 Query 44164 ATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATC 44223 || | | | || | || || | || || || |||||||| | ||| |||||||| Sbjct 104365 GTCTGACAATGTACGACCATCTTCTAATTGTTTGCCAGCAAAGATAAGACGTTGCTGATC 104306 Query 44224 TGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGA 44283 || ||| | || || || ||| || || ||| | || | || ||||| | | Sbjct 104305 TGGAGGAATTCCCTCTTTATCCTGGATTTTGGCCTTTACATTTTCGATAGTGTCTGAAGG 104246 Query 44284 TTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 ||| || || | || || || || || || || || ||||| || || ||||| Sbjct 104245 TTCTACTTCAAGGGTGATAGTTTTCCCTGTCAGTGTTTTCACAAATATCTGCAT 104192 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359663219687541