Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_002520.1 Length=232392 Score E Sequences producing significant alignments: (Bits) Value seq92178 98.7 1e-15 seq227251 96.9 5e-15 seq417728 93.3 6e-14 >seq92178 Length=3697 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 146056 TCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAAAGAGT 146115 || || |||||| |||||||||||||| | ||||||| | ||||||||||| || | || Sbjct 704 TCGAAATCTTAAAACCAAATGTAAAGTTGCTTCTTTATAAATATTATAATCAGACAAGGT 763 Query 146116 TCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGAATTCC 146175 ||| | || || | ||| ||||||||||| | || | ||| ||||| ||||| || Sbjct 764 TCTTCCGTCCTCCAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGGAATGCC 823 Query 146176 TTCTTTATC 146184 |||||| || Sbjct 824 TTCTTTGTC 832 >seq227251 Length=1814 Score = 96.9 bits (106), Expect = 5e-15 Identities = 107/140 (76%), Gaps = 2/140 (1%) Strand=Plus/Minus Query 146049 TTCCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCT 146107 ||||||| | || | || |||| ||| | || ||||| ||| || || || |||||| Sbjct 201 TTCCACCACGTAGACGCAAAACCAGATGGAGTGTGGATTCCTTTTGA-ATGTTGTAATCT 143 Query 146108 GAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGA 146167 |||||||| |||| ||| || | ||||||||| || || || ||||| || ||||| || Sbjct 142 GAAAGAGTCCTGCCATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGATCTGGT 83 Query 146168 GGAATTCCTTCTTTATCTTG 146187 ||||| ||||| || ||||| Sbjct 82 GGAATACCTTCCTTGTCTTG 63 >seq417728 Length=935 Score = 93.3 bits (102), Expect = 6e-14 Identities = 69/81 (85%), Gaps = 0/81 (0%) Strand=Plus/Plus Query 146096 ATATTATAATCTGAAAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTT 146155 ||||||||||| || | ||||| | ||| || || ||||||||||| ||||||||||| Sbjct 848 ATATTATAATCCGACAAGGTTCTTCCATCTTCCAACTGTTTTCCAGCGAAAATCAATCTC 907 Query 146156 TGCTGATCCGGAGGAATTCCT 146176 |||||||| |||||||||||| Sbjct 908 TGCTGATCTGGAGGAATTCCT 928 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734210627617280