Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq106915 109 4e-19 seq177116 105 5e-18 >seq106915 Length=3340 Score = 109 bits (120), Expect = 4e-19 Identities = 125/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Minus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || ||||||||||| || ||||||||||| |||||||||||||| ||||| || || Sbjct 1891 GGTGATTTGGGTCCAGTTTATGGATTTCAGTGGAGACATTTTGGTGCTGAGTACAAAGAT 1832 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | || | ||| ||||||||| || || |||||| | | || || || ||| Sbjct 1831 ATGCATGCAGACTATACTGGACAAGGTGTTGACCAATTAGCAGACGTCATCAACAAAATC 1772 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT 20385 ||||| || || | |||||| |||||||| | | || |||||| || Sbjct 1771 AAAACAAATCCTGATGACAGACGAATTATTATGTCAGCATGGAACCCT 1724 >seq177116 Length=2266 Score = 105 bits (116), Expect = 5e-18 Identities = 124/168 (74%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 20218 GGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATATGTTGAC 20277 || |||||||| ||||| ||||||||||| ||||||||||| || ||||| || || Sbjct 550 GGTGATTTGGGCCCTGTTTATGGATTTCAGTGGAGACATTTCGGTGCTGAGTACAAAGAT 609 Query 20278 ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTAATTTAATT 20337 ||| | || | ||| ||||||||| || || |||||| | | || || || ||| Sbjct 610 ATGCATGCAGACTATACTGGACAAGGTGTTGACCAATTAGCAGACGTCATCAACAAAATC 669 Query 20338 AAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCT 20385 ||||| || || | |||||| |||||||| | | || |||||| || Sbjct 670 AAAACAAATCCTGATGACAGACGAATTATTATGTCGGCATGGAACCCT 717 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394307589961630