Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_003102.1 Length=139342 Score E Sequences producing significant alignments: (Bits) Value seq83784 123 2e-23 >seq83784 Length=3932 Score = 123 bits (136), Expect = 2e-23 Identities = 167/233 (72%), Gaps = 0/233 (0%) Strand=Plus/Plus Query 57507 GATGAACCACTTTTGCAAGAGAATCCCCGTAGATTTGTCATGTTTCCGATTGAATATCCA 57566 || || ||| | ||| | || ||||| | ||||||| | || || ||||| |||| Sbjct 3615 GAAGAGCCATTGTTGAAGGATAATCCTAGACGATTTGTTGTCTTCCCCATTGAGTATCAT 3674 Query 57567 GACATTTGGAACATGTACAAAAAGGCAGAAGCATCGTTTTGGACCGTCGAAGAAGTAGAC 57626 ||||||||||| |||||||| || |||||||| || || ||||| | |||||||| || Sbjct 3675 GACATTTGGAAAATGTACAAGAAAGCAGAAGCCTCCTTCTGGACAGCTGAAGAAGTTGAT 3734 Query 57627 CTGTCTAAGGATCTGAGCGATTGGGATTCCCTCAAAGAATCTGAGAGAAATTTTATTAAA 57686 | ||||| ||||| | | ||||| | || ||||| |||| | |||||||| | Sbjct 3735 TTATCTAAAGATCTCATTCACTGGGACGCTCTGAAAGATGAGGAGAAACATTTTATTTCA 3794 Query 57687 CACGTGTTGGCGTTTTTCGCCGCATCCGATGGTATTGTTAACGAGAATTTGGT 57739 || || |||| || || || || ||||| ||||| || || || ||||| Sbjct 3795 CATGTCCTGGCTTTCTTTGCAGCTAGTGATGGCATTGTAAATGAAAACTTGGT 3847 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 440181314765280