Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq92178 102 6e-17 >seq92178 Length=3697 Score = 102 bits (112), Expect = 6e-17 Identities = 162/231 (70%), Gaps = 1/231 (0%) Strand=Plus/Plus Query 15146 AATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTC 15205 ||||||||||| ||||| | || | ||||| | || || ||||| | |||| Sbjct 708 AATCTTAAAACCAAATGTAAAGTTGCTTCTTTATAAATATTATAATCAGACAAGGTTCTT 767 Query 15206 GCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCT 15265 |||| || | ||| || ||||| | | ||||||||||| || | ||||| |||||| Sbjct 768 CCGTCCTCCAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGGAATGCCTTCT 827 Query 15266 TTGTCACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTA 15325 ||||||| ||||| ||| ||| ||||||| || || || | || || || ||| Sbjct 828 TTGTCACGTATTTTTGACTTGACATTTTCTATCGTGTCACTCCCCACGACCTCCAATGTA 887 Query 15326 ATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAAATAAA 15376 || ||||| || |||| ||||| || | ||||| ||| | |||| ||| Sbjct 888 ATCGTTTTCCCAGTCAATGTTTTGACGAGTATTTG-ATACTAAAAAAAAAA 937 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357754838586294