Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq106915 91.5 2e-13 seq177116 86.0 7e-12 >seq106915 Length=3340 Score = 91.5 bits (100), Expect = 2e-13 Identities = 123/169 (73%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT-AT 7121 || ||||| || | ||| | ||| ||||| |||| ||||||| |||| |||||||| || Sbjct 1725 GGGTTCCATGCTGACATAATAATTCGTCTGTCATCAGGATTTG-TTTTGATTTTGTTGAT 1783 Query 7122 AATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATT 7181 | | |||||| || | ||| || || ||| | | ||| || | | || | Sbjct 1784 GACGTCTGCTAATTGGTCAACACCTTGTCCAGTATAGTCTGCATGCATATCTTTGTACTC 1843 Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 ||| |||||||||||||| ||||| ||||||| ||||| ||||||||| Sbjct 1844 AGCACCAAAATGTCTCCACTGAAATCCATAAACTGGACCCAAATCACCT 1892 >seq177116 Length=2266 Score = 86.0 bits (94), Expect = 7e-12 Identities = 122/169 (72%), Gaps = 2/169 (1%) Strand=Plus/Minus Query 7063 GGATTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTT-AT 7121 || ||||| || | ||| | ||| ||||| |||| ||||||||||| | ||||||| || Sbjct 716 GGGTTCCATGCCGACATAATAATTCGTCTGTCATCAGGATTTGTTTTGA-TTTTGTTGAT 658 Query 7122 AATTATTTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATT 7181 | | |||||| || | ||| || || ||| | | ||| || | | || | Sbjct 657 GACGTCTGCTAATTGGTCAACACCTTGTCCAGTATAGTCTGCATGCATATCTTTGTACTC 598 Query 7182 AGCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCT 7230 ||| || ||||||||||| ||||| ||||||| ||| || ||||||||| Sbjct 597 AGCACCGAAATGTCTCCACTGAAATCCATAAACAGGGCCCAAATCACCT 549 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588406215434400