Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq276324 96.9 5e-16 >seq276324 Length=1496 Score = 96.9 bits (106), Expect = 5e-16 Identities = 168/243 (69%), Gaps = 1/243 (0%) Strand=Plus/Plus Query 16457 CGAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGA 16516 || ||||||||| |||| |||||||| ||||| |||||||||||| | | | ||| Sbjct 740 CGTGATAACATCGAAGGTATCACCAAAGAAGCTAGCCGTCGTCTGGCAAGAAGAGTTGGT 799 Query 16517 GTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTC 16576 ||||| | | ||||||| | || | | || | |||| ||| ||||| | || | Sbjct 800 GTCAAACATATCTCTGGTCTTATCCA-AAGGAAACACGTGGTGTCTTGAAAGTGTTTTTG 858 Query 16577 AAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACC 16636 | | |||| ||||||| | || || |||||| | || | ||||||||| || Sbjct 859 GGAAATGACATCCGTGATGCTGTAACATACACTGAGCACACAAAGAGGAAGACTGTCTCC 918 Query 16637 TCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGT 16696 | || ||| | |||| || ||||||||||||| ||| |||| || |||||| | Sbjct 919 GCTATAGATGTTTTCTACGCCCTGAAACGTCAAGGATGTACCCTTTAAGGATTTGGAGGG 978 Query 16697 TAA 16699 ||| Sbjct 979 TAA 981 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78158759007462