Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_008291.1 Length=198050 Score E Sequences producing significant alignments: (Bits) Value seq380849 356 3e-93 seq83784 138 1e-27 seq705227 118 1e-21 seq31841 100 4e-16 seq707336 98.7 1e-15 seq162926 96.9 4e-15 seq218873 93.3 5e-14 seq39285 91.5 2e-13 seq123025 89.7 6e-13 seq660234 87.8 2e-12 seq154428 87.8 2e-12 >seq380849 Length=1041 Score = 356 bits (394), Expect = 3e-93 Identities = 607/873 (70%), Gaps = 19/873 (2%) Strand=Plus/Plus Query 32390 TTTTTCGAAAAAATTAGTTTTACCTTCTAATGATATATTTTCCATGAAATCGAATGGATT 32449 |||||| |||||||| | | | || |||| || || ||||||||||| || ||||| Sbjct 92 TTTTTCAAAAAAATTTGATCTGCCGTCTAGAGAAATGTTTTCCATGAACGAAAAGGGATT 151 Query 32450 GGTAACATTA---TAAAtttttttAAATCCCAATTCAGAAATCAATCTATCTGCGACAAA 32506 | ||||| ||| || || |||||||| | | | || |||||| | || | Sbjct 152 TTTTGCATTAAAATAAGCTTCGTT---TCCCAATTGACACAACAGTCTATCACCAACGTA 208 Query 32507 TTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGTTTAACTGGAAGAGCCAC 32566 ||||||||| ||| ||| ||| ||||||| || || | | ||| | ||| Sbjct 209 TTCTATATACGTTGACATTTTTTTTGAATTCATCCCAATCAAATCGCATGGCAAAGCATT 268 Query 32567 AGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATAGATCTTACTGTTTCTTC 32626 | | | ||| || | |||||| | | || || |||||| || || ||||||| Sbjct 269 AATTAAAAAGTCCTTTTCAATTGCTATGGCATCAAGAATAATATCTCGAACGGTTTCTTT 328 Query 32627 ACTCGGTGGATACAATAAATGTT---TAAACATCAAACATGCGAAATCGCAGTGTAGACC 32683 | ||| | | |||||| | |||| | ||| ||||| || ||||| || | || Sbjct 329 AGAAGGTTTGTTAATTAAATGGTCGTTAAATAACAAGCATGCAAAGTCGCAATGCATCCC 388 Query 32684 CTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTT 32743 |||||||||||||||||||||||| || | | || | || || | ||||| Sbjct 389 TTCGTCTCTACTAATTAATTCGTTGCTGGCAGTTAACGCTGGTAATAATCCTCTATTTTT 448 Query 32744 AAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGGC 32803 || |||||| || |||||||| |||||||| ||||| ||||| || |||||||| || Sbjct 449 AATCCAAAAAATAGACGCAAAGCTACCAGAAAAAAAAATACCTTCAACCGCCGCAAAAGC 508 Query 32804 AATAAGTCTCTCTCCATAACCGGCGCTGTCA---TGTATCCACTTTTGAGCCCAATCGGC 32860 | ||| | |||||| ||| || | || |||||||| |||| | ||| || || Sbjct 509 CACAAGACGTTCTCCAAAACTCGCAGTCTCGGACTGTATCCATTTTTTACTCCATTCCGC 568 Query 32861 CTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATAGtttttttCATTACT 32920 ||| ||||| | ||||| || ||||| |||||||| | | | ||||||| || | Sbjct 569 CTTTTTTTTAATTGTGGGCATAGTTTCTATTGCATTAAATAAAAATTTTTTTTGCTTTCG 628 Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 |||||||| || | ||||| || ||||||||| |||||||| |||||||| || Sbjct 629 ATCTTTAATGTACGACTCAATTAACTGACTATACAACTCCGAATGTATGTTTTCCATCAT 688 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCG--GTAATCTGTACTTCTGTACAAAATCGT 33038 || |||||||| || || | | ||||| ||| | | |||||| | |||| ||| Sbjct 689 CACCTGAAATCCATAAAAAACTTTTGCCTCCAAGTATT--GGACTTCTTTGGAAAACCGT 746 Query 33039 TCTGCTAAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTT 33098 || ||| ||||||||| ||||| || ||||||||||||||||| ||||| || || | Sbjct 747 TCAACTATATTTTCATTAACTATGCCATCACTGGCTGCAAAAAAAGCCAAAACGTGAGAT 806 Query 33099 ATAAAATATTTTTC-GTCTGGTGTTAGT--TTATTCCAATCATTGATATCTTTAGATATA 33155 ||||| | | ||| | | | | | | || ||||||| ||| ||| |||| | | Sbjct 807 ATAAATTTTCGTTCTTTATCATTTAAATCATTTTTCCAATGCACGATGTCTGTAGAAAAA 866 Query 33156 TCCACTTCTTCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCA 33215 |||| ||||| || |||||||| || |||| | |||||||||| ||||| |||||| Sbjct 867 TCCAGCTCTTCAACCGTCCAAAAACTAGCTTCTGTCCTTTTATACATGTTCCATATGTCA 926 Query 33216 TGATATTGAATTGGAAAAATAACAAATCTATTT 33248 |||| ||| || ||| || ||||| | ||| || Sbjct 927 TGATGTTGTATAGGATAAGTAACATACCTACTT 959 >seq83784 Length=3932 Score = 138 bits (152), Expect = 1e-27 Identities = 150/199 (75%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 33045 AAATTTTCATTCACTATTCCGTCACTGGCTGCAAAAAACGCCAATACATGTTTTATAAAA 33104 || |||||||| || || || ||||| |||||||| || |||| |||||| |||||| Sbjct 3844 AAGTTTTCATTTACAATGCCATCACTAGCTGCAAAGAAAGCCAGGACATGTGAAATAAAA 3785 Query 33105 TATTTTTCGTCTGGTGTTAGTTTATTCCAATCATTGATATCTTTAGATATATCCACTTCT 33164 | ||| || || | | || | ||| | | ||| ||||||||||| ||| |||||| Sbjct 3784 TGTTTCTCCTCATCTTTCAGAGCGTCCCAGTGAATGAGATCTTTAGATAAATCAACTTCT 3725 Query 33165 TCCACTGTCCAAAATGATGCCTCTGCCTTTTTATACATATTCCAGATGTCATGATATTGA 33224 || ||||||| || || || ||||| || || ||||| ||||| ||||||||||| | | Sbjct 3724 TCAGCTGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATTTTCCAAATGTCATGATACTCA 3665 Query 33225 ATTGGAAAAATAACAAATC 33243 || || || | |||||||| Sbjct 3664 ATGGGGAAGACAACAAATC 3646 >seq705227 Length=470 Score = 118 bits (130), Expect = 1e-21 Identities = 162/226 (72%), Gaps = 3/226 (1%) Strand=Plus/Minus Query 32683 CCTCGTCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTT 32742 |||| ||||| || || | ||| ||| || ||||| || ||||| | || | ||||| Sbjct 316 CCTCATCTCTGCTGATGAGTTCATTGCTGAATGTGAGACCAGGCATAATTCCTCTCTTTT 257 Query 32743 TAAGCCAAAATATGGACGCAAATGATCCAGAAAAGAAAATTCCTTCTACTGCCGCAAAGG 32802 | | ||| ||||| | ||||| ||||| || || || ||||| || || ||||||| Sbjct 256 TCAACCAGAATATTGCTGCAAAACTGCCAGAGAAAAATATCCCTTCAACAGCTGCAAAGG 197 Query 32803 CAATAAGTCTCTCTCCATAACCGGCGCTG---TCATGTATCCACTTTTGAGCCCAATCGG 32859 ||| || ||| ||| |||| || | |||| |||||| || ||||| || | Sbjct 196 CAACAACTCTTTCTGCATATGATGCATTTGTTTCATTTATCCATTTAATGGCCCAGTCTG 137 Query 32860 CCTTCTTTTTTACACAAGGCATTGTCTCTATAGCATTAAAGAGATA 32905 |||||||||| ||||| || | ||||| |||||||| || ||||| Sbjct 136 CCTTCTTTTTCACACATGGTAAAGTCTCAATAGCATTGAATAGATA 91 >seq31841 Length=6731 Score = 100 bits (110), Expect = 4e-16 Identities = 187/267 (70%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 155948 GATGATAATACGTTAAGGGTTTTGCAAGACCAA-TTAACGATGGTTAAAATTAACAAGGA 156006 ||||| || |||||| | |||||| | || || ||| | | ||||| | || || Sbjct 2957 GATGACAAGACGTTAGACGAATTGCAAAAAGAACTTGACGTTA-TCAAAATCAGTAAAGA 2899 Query 156007 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAA-AATCTATATTCCCGATTTTGTAG 156065 | | |||| | || | |||||| || || || ||| || ||||| || ||||| | Sbjct 2898 TGCTTTAAAAGTCCCCAACTGGTTGAATGTGAACAAGAATTTA-ATTCCTGACTTTGTGG 2840 Query 156066 TAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTTTACACCTTCCA 156125 | | || |||||| | || | ||| ||||||||| ||||||||||||| | || Sbjct 2839 TCAAAGACCCGAAAAAGTCACCAATCTGGGAAATTATGGGAGCAGAGTTTAGTCAATCTT 2780 Query 156126 AGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGAAG 156185 | |||||||| |||||||||| || ||||||| ||| || ||| | ||||| | Sbjct 2779 CTGCCCATACAGCTGATGGAATATCAATACGATTTCCAAGAATTGCTAAAGTCAGAGACG 2720 Query 156186 ATAAAACGTGGAAAGAAT-CTACTCAT 156211 ||||||| ||| ||||| ||||| || Sbjct 2719 ATAAAACTTGG-GAGAATGCTACTGAT 2694 >seq707336 Length=468 Score = 98.7 bits (108), Expect = 1e-15 Identities = 152/212 (72%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 155990 GTTAAAATTAACAAGGATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT 156049 || || || ||||| || || ||| | ||| | ||||| |||||||| || | Sbjct 466 GTGAAGATCAACAAAGACGTCACCAAAGTACCAAACTGGTTACATGTTAATAAG-TCCCT 408 Query 156050 ATTCCC-GATTTTGTAGTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGC 156108 |||| |||||||| || |||| || | | |||| | ||| ||||||||| ||| || Sbjct 407 GGTCCCTGATTTTGTTGTCAAGGACCCAAGAGAATCGCCAATTTGGGAAATTATAGGGGC 348 Query 156109 AGAGTTTACACCTTC-CAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGAT 156167 |||||||| || | || | |||||||| |||| ||||||||||||||||| || Sbjct 347 AGAGTTTAGTAAATCTCCAGCC-CATACAGCTGATGGGATATCGATTAGATTTCCCAGGA 289 Query 156168 TTACTAGGATTAGAGAAGATAAAACGTGGAAA 156199 || || ||||||| |||||||| ||| || Sbjct 288 TTGCTGAAGTTAGAGATGATAAAACATGGGAA 257 >seq162926 Length=2426 Score = 96.9 bits (106), Expect = 4e-15 Identities = 89/113 (79%), Gaps = 0/113 (0%) Strand=Plus/Plus Query 62816 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 62875 |||||||| || |||||||||| |||||||||||| ||| ||||||| |||||| Sbjct 128 TTACTACATTTAATGGTTCCTAGATTTTGTTGATTTGACTTCCTGTTACAGTGATCCTTG 187 Query 62876 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 62928 || | ||| |||| ||||||||||| | ||||||||||| || || | ||| Sbjct 188 TATAACATGTATGGTGTACCAGTTTCTGTTTGAGATTCTATGATGGCATACCA 240 >seq218873 Length=1880 Score = 93.3 bits (102), Expect = 5e-14 Identities = 332/513 (65%), Gaps = 17/513 (3%) Strand=Plus/Plus Query 62795 TGTATTATCTCAGTGCAAAGATTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTC 62854 ||||| || || | || ||||| || | ||| || || ||||||| || || || Sbjct 469 TGTATGATTTCTGCACACAGATTGCTGCTCTTTATAGTCCCTAAATGTTTATGGTTGGAT 528 Query 62855 TTTTTGTTACACGCATCCTTATAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCT 62914 |||| |||||| |||| || || ||| | || || || |||||||| || | Sbjct 529 TTTTCGTTACATTCATCTTTGAGTAGCATGTAAGGGGTTCCGGTTTCAATTTGTGCCATA 588 Query 62915 ATAATCGCTTTCCAGACGACTCGAGCCTTTATTA-TAGATTTGTATCTCTTT------TC 62967 ||||| || ||| | |||| ||||||| | | |||| |||| |||| || Sbjct 589 ATAATACTTTGCCATATATCTCGGGCCTTTACAACTTGATT-GTATTTCTTACTGGGATC 647 Query 62968 TCTTTCGTATAGTGTATACAATCGTTCGAACTCGTCTCCCCAAACATTGTCCAGTCCAGG 63027 | ||||| || || || ||| ||||| | || | || | | || Sbjct 648 ATTCTCGTAAGACGTGTATAACTTTTCAAACTCAGCACCGTAGCAATCGGATAAACCTTC 707 Query 63028 ACATTCATCCGGACACATCAACGACCACTCTCCGTCATCCTTCACTCGTTTCATAAAGAG 63087 |||||| |||||||| || | ||| ||| | || | |||| || | ||| || Sbjct 708 ACATTCGCTAGGACACATTAAAGTCCAGTCTGCACCAGCTCGAACTCTTTCAAAAAACAG 767 Query 63088 ATCAGGAATCCAAAGAGCTATAAATAGATCTCTGGTTCTATGTTCCTCGTTTCCTGTATT 63147 || |||| ||| | ||| | || | ||||||||| || | ||| || || ||||| Sbjct 768 ATTCGGAAGCCATAACGCTGTGAACAAATCTCTGGTCCTTTCTTCATCTACCCCCGTATT 827 Query 63148 CTTTTTAAGATCGAGGAACGCCATAATATCAGAATGCCACGGTTCCAAGTATATGGCCAT 63207 ||||||||||| | |||||| || || || | |||||| |||||| || | | | Sbjct 828 TTTTTTAAGATCTAAGAACGCAATTATGTCGGCATGCCATGGTTCC-AGAAAA-----AA 881 Query 63208 AACTCCAGG-CCGTTTGTTT--CCTCCCTGATCTATGTATCTAGCGGTGTTATTATAAAC 63264 ||| ||| || ||| ||| ||||||||| | | ||| | ||| |||| |||| Sbjct 882 AACCAAAGGTCCCTTTCTTTTATCTCCCTGATTGACGAGTCTTGTCGTGGAATTAAAAAC 941 Query 63265 TCTCAACATTGGAATAATACCATTGGATGTACC 63297 ||| ||| ||| | |||||| ||| |||| Sbjct 942 TCTTAACCGTGGCACTATACCACGAGATATACC 974 >seq39285 Length=6060 Score = 91.5 bits (100), Expect = 2e-13 Identities = 185/267 (69%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 155948 GATGATAATACGTTAAGGGTTTTGCAAGACCAA-TTAACGATGGTTAAAATTAACAAGGA 156006 ||||| || |||||| | |||||| | || || ||| || | ||||| | ||| || Sbjct 5172 GATGACAAGACGTTAGACGAATTGCAAAAAGAACTTGACGTTG-TCAAAATCAGCAAAGA 5114 Query 156007 TCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAA-AATCTATATTCCCGATTTTGTAG 156065 | | |||| |||| | ||||| || || || ||| || ||||| || ||||| | Sbjct 5113 TGCTTTAAAAGTTCCCAACTGGTTAAATGTGAACAAGAATTTA-ATTCCTGACTTTGTGG 5055 Query 156066 TAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGCAGAGTTTACACCTTCCA 156125 | | ||||||||| | || | ||| |||||||| ||||||||||| | | || Sbjct 5054 TCAAAGATCCGAAAAAGTCACCAATCTGGGAAATCATGGGAGCAGAGTTCAGTCAATCTT 4995 Query 156126 AGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGATTTACTAGGATTAGAGAAG 156185 | |||||||| |||| ||||| || ||||||| ||| | | | | ||||| | Sbjct 4994 CTGCCCATACAGCTGATGGTATATCAATACGATTTCCAAGAATCGCCAAAGTCAGAGATG 4935 Query 156186 ATAAAACGTGGAAAGAAT-CTACTCAT 156211 ||||||| ||| ||||| ||||| || Sbjct 4934 ATAAAACTTGG-GAGAATGCTACTGAT 4909 >seq123025 Length=3020 Score = 89.7 bits (98), Expect = 6e-13 Identities = 150/212 (71%), Gaps = 4/212 (2%) Strand=Plus/Plus Query 155990 GTTAAAATTAACAAGGATCCCaaaaaaaTTCCAGAGTGGTTGGTAGTTAATAAAATCTAT 156049 || || || ||||| || || ||| | ||| | ||||| |||||||| || | Sbjct 2316 GTGAAGATCAACAAAGACGTCACCAAAGTACCAAACTGGTTACATGTTAATAAG-TCCCT 2374 Query 156050 ATTCCC-GATTTTGTAGTAGAGGATCCGAAACAATCTCAAATATGGGAAATTTCAGGAGC 156108 |||| |||||||| || |||| || ||| |||| | ||| ||||||||| ||||| Sbjct 2375 GGTCCCTGATTTTGTTGTCAAGGACCCAAAAGAATCGCCAATTTGGGAAATTATTGGAGC 2434 Query 156109 AGAGTTTA-CACCTTCCAAGTCACATACAGCGAATGGAATATCGATTAGATTTCCTAGAT 156167 |||||||| | | | || | |||||||| |||| ||||| || ||||| || || Sbjct 2435 AGAGTTTAGTAAATCACCAG-CCCATACAGCTGATGGGATATCAATCAGATTCCCCAGGA 2493 Query 156168 TTACTAGGATTAGAGAAGATAAAACGTGGAAA 156199 || || ||||||| |||||||| ||| || Sbjct 2494 TTGCTGATGTTAGAGATGATAAAACATGGGAA 2525 >seq660234 Length=515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 92/121 (76%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 32921 ATCTTTAACATATGTATCAATCAAAAGACTATACATTTCCGAATGAATGTTTTCAATGGC 32980 ||| |||| ||||||||||| || | || |||||||| ||||||||||| || || || Sbjct 265 ATCCTTAATGTATGTATCAATTAACAAGCTGTACATTTCAGAATGAATGTTCTCCATTGC 206 Query 32981 CATTTGAAATCCGTAGAAGCATCTAGCCTCGGTAATCTGTACTTCTGTACAAAATCGTTC 33040 || || ||||| ||||| || || ||||| ||| || ||||| ||| |||| ||| Sbjct 205 TATCTGGAATCCATAGAAACACCTTGCCTCTGTAGCTTGAACTTCCTTACTGAATCTTTC 146 Query 33041 T 33041 | Sbjct 145 T 145 >seq154428 Length=2533 Score = 87.8 bits (96), Expect = 2e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 62816 TTACTACACTTGATGGTTCCTAAATTTTGTTGATTACTCTTTTTGTTACACGCATCCTTA 62875 |||||||| || |||||||||| |||||| ||||| ||| ||||||| |||||| Sbjct 1264 TTACTACATTTAATGGTTCCTAGATTTTGCTGATTTGACTTCCTGTTACAGTGATCCTTG 1205 Query 62876 TAAAGAATGAATGGAGTACCAGTTTCAATCTGAGATTCTATAATCGCTTTCCA 62928 || | ||| | || ||||||||||| | ||||||||||| || || | ||| Sbjct 1204 TATAACATGTAAGGGGTACCAGTTTCTGTTTGAGATTCTATGATGGCATACCA 1152 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 625693113786400