Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq83784 149 7e-31 seq705227 118 1e-21 seq660234 87.8 2e-12 >seq83784 Length=3932 Score = 149 bits (164), Expect = 7e-31 Identities = 170/226 (75%), Gaps = 2/226 (1%) Strand=Plus/Minus Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 |||||||| || || ||||| |||||||| ||||||| | ||| ||||||||| Sbjct 3841 TTTTCATTTACAATGCCATCACTAGCTGCAAAGAAAGCCAGGACATGTGAAATAAAATGT 3782 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGAT-AGATCTTTTGAAAGATCGACTTCTTC 93600 ||||| |||||||| || ||||| | | || |||||||| || | ||| |||||||| Sbjct 3781 TTCTCCTCATCTTTCAGAGCGTCCCAGT-GAATGAGATCTTTAGATAAATCAACTTCTTC 3723 Query 93601 GACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAAT 93660 | ||||| || || ||||||||||| |||||||| | ||| ||||| ||||| | ||| Sbjct 3722 AGCTGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATTTTCCAAATGTCATGATACTCAAT 3663 Query 93661 TGGAAATATGACAAAACGATTAGGGTTATCTTTTAGTAACGGCTCT 93706 || || | ||||| || |||| ||||| || | || |||||| Sbjct 3662 GGGGAAGACAACAAATCGTCTAGGATTATCCTTCAACAATGGCTCT 3617 >seq705227 Length=470 Score = 118 bits (130), Expect = 1e-21 Identities = 154/211 (73%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 93134 TCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGCA 93193 |||||||||||||| | ||| || | | ||||| || || | ||| ||||||| ||| Sbjct 296 TCATTGCTGAATGTGAGACCAGGCATAATTCCTCTCTTTTTCAACCAGAATATTGCTGCA 237 Query 93194 AAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAAA 93253 ||||| ||||| |||||||| ||||| || |||||||| || |||| | ||| ||| | Sbjct 236 AAACTGCCAGAGAAAAATATCCCTTCAACAGCTGCAAAGGCAACAACTCTTTCTGCATAT 177 Query 93254 TTTGCGGAATTACTGC--TGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAG 93311 ||| | || | | | |||||||| | ||||| || || || || || | ||| | Sbjct 176 GATGC--ATTTGTTTCATTTATCCATTTAATGGCCCAGTCTGCCTTCTTTTTCACACATG 119 Query 93312 GTAGTGTTTCGATAGCGTTAAATAGGTAATC 93342 ||| || || ||||| || ||||| ||||| Sbjct 118 GTAAAGTCTCAATAGCATTGAATAGATAATC 88 >seq660234 Length=515 Score = 87.8 bits (96), Expect = 2e-12 Identities = 89/116 (77%), Gaps = 0/116 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||||||||| ||||||| |||||||||||||| | ||||||||||| || ||| Sbjct 258 ATGTATGTATCAATTAACAAGCTGTACATTTCAGAATGAATGTTCTCCATTGCTATCTGG 199 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTAC 93477 ||||| |||||||| || || || || || ||||| | | ||||| ||||| Sbjct 198 AATCCATAGAAACACCTTGCCTCTGTAGCTTGAACTTCCTTACTGAATCTTTCTAC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 549883793586160