Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq227251 149 1e-30 >seq227251 Length=1814 Score = 149 bits (164), Expect = 1e-30 Identities = 156/205 (76%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 ||||| |||| || || || ||||| |||| || || ||||| || ||||| ||||| | Sbjct 207 TTTAAATTCCACCACGTAGACGCAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGT 148 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 |||| || || ||||| |||||||| | || || || ||||| || | ||| ||||| | Sbjct 147 AATCTGAAAGAGTCCTGCCATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGAT 88 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | |||||||| |||||||||||||| ||||| || || || ||| ||||| || | || Sbjct 87 CTGGTGGAATACCTTCCTTGTCTTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATG 28 Query 68407 ATTCTACTTCCAAGGTGATGGTTTT 68431 ||| || || | ||||| ||||| Sbjct 27 GTTCAACCTCTAGAGTGATTGTTTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 910075231666480