Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq380849 96.9 3e-15 >seq380849 Length=1041 Score = 96.9 bits (106), Expect = 3e-15 Identities = 390/605 (64%), Gaps = 11/605 (2%) Strand=Plus/Plus Query 132883 TTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTCGTCCCTGGAAATGAGTTCGTTG 132942 || || | |||||| |||||||||||||||| || ||||| || ||| | ||||||| Sbjct 354 TTAAATAACAAGCATGCAAAGTCGCAATGCATCCCTTCGTCTCTACTAATTAATTCGTTG 413 Query 132943 CTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAGCCAAAATATGGCGGCGAAACTG 133002 ||| ||| || | || | | || | ||||| | |||||| || | || || || Sbjct 414 CTGGCAGTTAACGCTGGTAATAATCCTCTATTTTTAATCCAAAAAATAGACGCAAAGCTA 473 Query 133003 CCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCACCAGGCGCTCGCCGAACGTGGC- 133061 || ||||| || | || || || ||||| |||||||| || || || || || | || Sbjct 474 CCAGAAAAAAAAATACCTTCAACCGCCGCAAAAGCCACAAGACGTTCTCCAAAACTCGCA 533 Query 133062 TTCTTTG-CTGGCGATCCAGCGCAGCGCCCATTCGGCCTTTTCTTTGACGCACGGCATCG 133120 ||| | ||| ||||| |||||| ||||||| ||| | ||||| | Sbjct 534 GTCTCGGACTG--TATCCATTTTTTACTCCATTCCGCCTTTTTTTTAATTGTGGGCATAG 591 Query 133121 TTTCGATGGCGTTCAACAAACGGAGTTTCT-CTTCCGAGGAACGCACGTAGGTGTCGATG 133179 |||| || || || || ||| ||| | ||| ||| | ||| | || || Sbjct 592 TTTCTATTGCATTAAATAAAAATTTTTTTTGCTTTCGA-TCTTTAATGTACGACTCAATT 650 Query 133180 AGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGAAAGCCGTAAAAGCAC 133239 | ||||| ||||| |||| ||| ||||| | ||||| || ||||| Sbjct 651 AACTGACTATACAACTCCGAATGTATGTTTTCCATCATCACCTGAAATCCATAAAAAACT 710 Query 133240 CGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGATTTTCGTTGACGATG 133299 ||||| | || ||||||| | || || || || | |||||| || || ||| Sbjct 711 TTTGCCTCCAAGTATTGGACTTCTTTGGAAAACCGTTCAACTATATTTTCATTAACTATG 770 Query 133300 CCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGGCGCTCGTTGTCGTTC 133359 || || ||||| || ||||| |||| ||||| || || | || || || || || Sbjct 771 CCATCACTGGCTGCAAAAAAAGCCAAAACGTGAGATATAAATTTTCGTTCTTTATCATTT 830 Query 133360 AA---GCGCTCCCAGTCGCGCG-TGTCCTTGGACAGGTCCACCTCCTCGACGGTCCAAAA 133415 || | ||| | || || |||| | || | |||| ||| || || |||||||| Sbjct 831 AAATCATTTTTCCAAT-GCACGATGTCTGTAGAAAAATCCAGCTCTTCAACCGTCCAAAA 889 Query 133416 CGACGCCTCGGCTTTTTTGTACATACTCCACATGTCCGAATATTGTATGGGAAAAATCAC 133475 || || | |||| ||||| |||| ||||| || |||||| ||| || | || Sbjct 890 ACTAGCTTCTGTCCTTTTATACATGTTCCATATGTCATGATGTTGTATAGGATAAGTAAC 949 Query 133476 AAACC 133480 | ||| Sbjct 950 ATACC 954 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 493906047458560