Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq210539 87.8 2e-12 seq148768 82.4 9e-11 >seq210539 Length=1946 Score = 87.8 bits (96), Expect = 2e-12 Identities = 66/78 (85%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 |||||||||| | ||||| | ||| | | |||| ||||| |||||||| ||||||||||| Sbjct 1102 GTAGATGTTACTGGTGTAAGCTTCTATAGACTCGTTGTTACCTAGGATCTGTGCAGTGGA 1043 Query 109812 AGCTGTGGGCATGGGAGC 109829 |||||| ||||| ||||| Sbjct 1042 AGCTGTAGGCATTGGAGC 1025 >seq148768 Length=2609 Score = 82.4 bits (90), Expect = 9e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Minus Query 109752 GTAGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGA 109811 |||||||||| | ||||| | || | | |||| ||||| |||||||| ||||||||||| Sbjct 294 GTAGATGTTACTGGTGTAAGCCTCTATAGACTCGTTGTTACCTAGGATCTGTGCAGTGGA 235 Query 109812 AGCTGTGGGCATGGGAGC 109829 |||||| ||||| ||||| Sbjct 234 AGCTGTAGGCATTGGAGC 217 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 581596616625200