Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq227251 138 2e-27 seq92178 109 1e-18 >seq227251 Length=1814 Score = 138 bits (152), Expect = 2e-27 Identities = 135/174 (78%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 194928 CAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATC 194987 |||||| || || || ||||| || |||||||| |||||||| | |||||| || ||||| Sbjct 185 CAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGTAATCTGAAAGAGTCCTGCCATC 126 Query 194988 TTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTC 195047 ||| || || || ||||||||||| | || ||||| ||||| ||||| ||||| ||||| Sbjct 125 TTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGATCTGGTGGAATACCTTCCTTGTC 66 Query 195048 TTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||| || || || || ||||||||||| ||||| ||| || || || || Sbjct 65 TTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATGGTTCAACCTCTAGAGT 12 >seq92178 Length=3697 Score = 109 bits (120), Expect = 1e-18 Identities = 159/221 (72%), Gaps = 8/221 (4%) Strand=Plus/Plus Query 194914 TTTTATCTGAGTCTCAAAACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-C 194972 ||| ||| | ||| ||||| | || | ||| | ||||| | |||||| ||||| | | Sbjct 699 TTTGATCGAAATCTTAAAACCAAATGTAAAGTTGCTTCTTTATAAATATTATAATCAGAC 758 Query 194973 AAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGG 195032 ||| ||||| || || || || ||||| || || |||| | |||||||| ||| || Sbjct 759 AAG-GTTCTTCCGTCCTCCAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGG 817 Query 195033 AATGCCTTCTTTGTCTTGAATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCC-- 195090 ||||||||||||||| | |||||| |||||| || || || ||||| ||| || Sbjct 818 AATGCCTTCTTTGTCACGTATTTTTGACTTGACATTTTCTATCGTGTC---ACTCCCCAC 874 Query 195091 -ACTTCAAGGGTAACCGTCTTTCCTGTCAAAGTTTTTACGA 195130 || || | |||| ||| || || ||||| ||||| |||| Sbjct 875 GACCTCCAATGTAATCGTTTTCCCAGTCAATGTTTTGACGA 915 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1095233188646178