Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq92178 104 2e-17 seq687910 96.9 3e-15 seq141001 82.4 6e-11 >seq92178 Length=3697 Score = 104 bits (114), Expect = 2e-17 Identities = 149/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 101257 TAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATC 101316 |||||| ||||| | || | |||||| | ||||| ||||| | | ||||| | || Sbjct 713 TAAAACCAAATGTAAAGTTGCTTCTTTATAAATATTATAATCAGACAAGGTTCTTCCGTC 772 Query 101317 GTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATC 101376 |||| |||||| || ||||| | ||||| |||||||| ||||||||||||||| || Sbjct 773 CTCCAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGGAATGCCTTCTTTGTC 832 Query 101377 TTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGT 101436 | |||||| || ||| |||||| |||||| | | || || | || | ||| Sbjct 833 ACGTATTTTTGACTTGACATTTTCTATCGTGTCACTCCCCACGACCTCCAATGTAATCGT 892 Query 101437 TTTGCCGGTTAAAGTTTTTACAAATATCTG 101466 ||| || || || ||||| || | ||| || Sbjct 893 TTTCCCAGTCAATGTTTTGACGAGTATTTG 922 >seq687910 Length=490 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || || | |||||| || | ||| ||||||||||| || || || |||||||| | | Sbjct 149 CCACCCCTCAGACGTAATACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAG 90 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | ||||| |||| ||||| |||||||| ||||| ||||| | ||| ||||| || || Sbjct 89 AGGGTTCTTCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGG 30 Query 101363 ATGCCT 101368 || ||| Sbjct 29 ATACCT 24 >seq141001 Length=2723 Score = 82.4 bits (90), Expect = 6e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 101362 AATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCAC 101421 ||| ||||| ||||||||||||||| || ||| |||||| |||||||| | || || Sbjct 2118 AATACCTTCCTTATCTTGAATTTTTGCCTTGACATTTTCTATGGTGTCAGAGGGCTCGAC 2177 Query 101422 TTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || || | || || || ||||| ||||| ||||| |||||||| Sbjct 2178 CTCTAGGGTTATGGTCTTCCCTGTTAATGTTTTAACAAAGATCTGCAT 2225 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 391437484613238