Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_021246.1 Length=281182 Score E Sequences producing significant alignments: (Bits) Value seq227251 104 4e-17 >seq227251 Length=1814 Score = 104 bits (114), Expect = 4e-17 Identities = 146/205 (71%), Gaps = 0/205 (0%) Strand=Plus/Minus Query 193126 TTTATATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTAT 193185 |||| || ||||| | | || | |||||||| | ||| | || || ||| || | Sbjct 207 TTTAAATTCCACCACGTAGACGCAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGT 148 Query 193186 AGTCGGATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGAT 193245 | || || | || || ||| || | ||||||||| || || |||||||||||||||| Sbjct 147 AATCTGAAAGAGTCCTGCCATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGAT 88 Query 193246 CAGGAGGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAG 193305 | || || || ||||| || ||||| || || | ||| | ||| ||| ||||| || | Sbjct 87 CTGGTGGAATACCTTCCTTGTCTTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATG 28 Query 193306 ACTCAACTTCTAGAGTTATAGTTTT 193330 ||||| |||||||| || ||||| Sbjct 27 GTTCAACCTCTAGAGTGATTGTTTT 3 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 888382472582880