Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq83784 84.2 6e-11 >seq83784 Length=3932 Score = 84.2 bits (92), Expect = 6e-11 Identities = 141/199 (71%), Gaps = 4/199 (2%) Strand=Plus/Plus Query 133076 TTTGTTATGTTCCCAATTAAGGACGACGAGATTTGGCAGATGTATAAAAAA-CAGCAAGA 133134 |||||| | ||||| ||| || | | || |||||| | ||||| || ||| ||| ||| Sbjct 3648 TTTGTTGTCTTCCCCATTGAGTATCATGACATTTGGAAAATGTACAAGAAAGCAG-AAGC 3706 Query 133135 TTTATTTTGGACTTCAACTGAAGTAGATTTATCCAAAGACCCAGCCCACTGGGAAGCCCT 133194 | || ||||| | ||||| |||||||| ||||| | |||||||| || || Sbjct 3707 CTCCTTCTGGACAGCTGAAGAAGTTGATTTATCTAAAGATCTCATTCACTGGGACGCTCT 3766 Query 133195 TACTGGGGATGAAAAACATTTTATTTC-TATGATTTTAGCGTTTTTTGCTGCGAGTGATG 133253 | | || || |||||||||||||| ||| | | || || ||||| || ||||||| Sbjct 3767 GAAAGATGAGGAGAAACATTTTATTTCACATG-TCCTGGCTTTCTTTGCAGCTAGTGATG 3825 Query 133254 GTATTGTTCTTGAAAATTT 133272 | ||||| |||||| || Sbjct 3826 GCATTGTAAATGAAAACTT 3844 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1452915923214558