Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_021923.1 Length=140633 Score E Sequences producing significant alignments: (Bits) Value seq227251 109 5e-19 seq162926 104 2e-17 seq92178 96.9 3e-15 seq687910 82.4 7e-11 >seq227251 Length=1814 Score = 109 bits (120), Expect = 5e-19 Identities = 135/185 (73%), Gaps = 0/185 (0%) Strand=Plus/Plus Query 24734 AAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACGGTAAAACAAAAGATC 24793 ||||| || || || || || ||| | | || || | || | || ||| |||||| Sbjct 3 AAAACAATCACTCTAGAGGTTGAACCATCGGATACCATTGAGAATGTTAAAGCTAAGATC 62 Query 24794 CAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTG 24853 |||||||| ||||| || || || |||||||| | || ||||| || || ||||| || Sbjct 63 CAAGACAAGGAAGGTATTCCACCAGATCAACAGAGATTAATCTTCGCAGGAAAACAACTT 122 Query 24854 GAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACACTTGGTG 24913 || ||| || | | |||||||| ||||||||||||||||| ||||| || |||| Sbjct 123 GAAGATGGCAGGACTCTTTCAGATTACAACATTCAAAAGGAATCCACACTCCATCTGGTT 182 Query 24914 TTGCG 24918 ||||| Sbjct 183 TTGCG 187 >seq162926 Length=2426 Score = 104 bits (114), Expect = 2e-17 Identities = 111/147 (76%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 139105 ACTTCGTCGGGGTCGCTGTATTCGACAATTTCGGCACACAAATTACTACACTTGATCGTA 139164 || || || ||| ||||||||| |||||||| | |||||| |||||||| || || || Sbjct 86 ACCTCATCAGGGCTGCTGTATTCCACAATTTCTGTACACAAGTTACTACATTTAATGGTT 145 Query 139165 CCTAAATTTTGTTGATTGCTTTTTCGGTTACAAGCATCTTTGTAAAGCATATACGGTGTG 139224 |||| |||||||||||| || | |||||| ||| ||||| | ||| || ||||| Sbjct 146 CCTAGATTTTGTTGATTTGACTTCCTGTTACAGTGATCCTTGTATAACATGTATGGTGTA 205 Query 139225 CCAGTTTCCACTTGTGTCTCTATAATG 139251 |||||||| ||| | ||||| ||| Sbjct 206 CCAGTTTCTGTTTGAGATTCTATGATG 232 >seq92178 Length=3697 Score = 96.9 bits (106), Expect = 3e-15 Identities = 145/206 (70%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 24719 AAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACCGACACAGTAGAAACG 24778 ||||| | || || ||||| ||||| | || || | | | ||||| |||||| Sbjct 910 AAAACATTGACTGGGAAAACGATTACATTGGAGGTCGTGGGGAGTGACACGATAGAAAAT 851 Query 24779 GTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAACAACGTTTGATCTTT 24838 || || ||| || | ||||||||||| || || |||||||||||||| ||||| Sbjct 850 GTCAAGTCAAAAATACGTGACAAAGAAGGCATTCCGGAAGATCAACAACGTTTATTCTTT 791 Query 24839 GCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAACATTCAAAAGGAATCG 24898 || || || || |||||||| |||| | |||| |||||||| ||| | || ||| | Sbjct 790 GCTGGAAAGCAACTGGAGGACGGAAGAACCTTGTCTGATTATAATATTTATAAAGAAGCA 731 Query 24899 ACACTACACTTGGTGTTGCGATTGCG 24924 || |||| ||||| || |||| || Sbjct 730 ACTTTACATTTGGTTTTAAGATTTCG 705 >seq687910 Length=490 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/107 (78%), Gaps = 1/107 (1%) Strand=Plus/Plus Query 24805 AGGAATACCTCCCGATCAACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAG 24864 ||| || || || ||||| || | |||||||||||||| || ||| |||||||| || Sbjct 24 AGGTATCCCCCCAGATCAGCAGAGATTGATCTTTGCCGGTAAGCAGTTGGAGGATGGAAG 83 Query 24865 AAACATGTCAGATTATAACATTCAAAAGGAATCGACACTACA-CTTG 24910 || | | || ||||| |||||||| |||||||| || || || |||| Sbjct 84 AACCCTCTCTGATTACAACATTCAGAAGGAATCTACCCTCCATCTTG 130 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444260754237520