Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_023442.1 Length=120420 Score E Sequences producing significant alignments: (Bits) Value seq227251 109 4e-19 seq141001 91.5 1e-13 >seq227251 Length=1814 Score = 109 bits (120), Expect = 4e-19 Identities = 137/188 (73%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 29571 ACGCAGCACCAAATGAAGCGTGGATTCTTTTTGAATGTTATAATCCGCAATGGTGCGAGA 29630 ||||| |||| ||| || |||||||| ||||||||||| ||||| | || || | Sbjct 188 ACGCAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGTAATCTGAAAGAGTCCTGCC 129 Query 29631 ATCATCGAGTTGTTTGCCAGCATATATCAATCTTTGCTGATCCGGCGGAATACCCTCTTT 29690 ||| || |||||||| || || | || ||||| || ||||| || |||||||| || || Sbjct 128 ATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGATCTGGTGGAATACCTTCCTT 69 Query 29691 GTCTTGTAATTTTTGTTTGACAGTTTCTACAGTGTCAGAAAGTTCTACTTCAAGAGTTAT 29750 |||||| | || ||| ||| | || | || || || |||| || || ||||| || Sbjct 68 GTCTTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATGGTTCAACCTCTAGAGTGAT 9 Query 29751 AGTTTTGC 29758 ||||||| Sbjct 8 TGTTTTGC 1 >seq141001 Length=2723 Score = 91.5 bits (100), Expect = 1e-13 Identities = 89/112 (79%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 29679 AATACCCTCTTTGTCTTGTAATTTTTGT-TTGACAGTTTCTACAGTGTCAGAAAGTTCTA 29737 |||||| || || ||||| |||||||| |||||| |||||| |||||||| | || | Sbjct 2118 AATACCTTCCTTATCTTG-AATTTTTGCCTTGACATTTTCTATGGTGTCAGAGGGCTCGA 2176 Query 29738 CTTCAAGAGTTATAGTTTTGCCAGTTAAGGTTTTAACAAATATCTGCATTTT 29789 | || || ||||| || || || ||||| ||||||||||| |||||||| || Sbjct 2177 CCTCTAGGGTTATGGTCTTCCCTGTTAATGTTTTAACAAAGATCTGCATCTT 2228 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380513383199094