Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq687910 87.8 1e-12 seq92178 82.4 5e-11 >seq687910 Length=490 Score = 87.8 bits (96), Expect = 1e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 ||||| |||| |||||| || | ||| || || || || || ||||||||||| ||| Sbjct 149 CCACCCCTCAGACGTAATACAAGATGGAGGGTAGATTCCTTCTGAATGTTGTAATCAGAG 90 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 || || | | | || ||||| || || |||||||| ||||| | |||||||||| | || Sbjct 89 AGGGTTCTTCCATCCTCCAACTGCTTACCGGCAAAGATCAATCTCTGCTGATCTGGGGGG 30 Query 33643 ACACCT 33648 | |||| Sbjct 29 ATACCT 24 >seq92178 Length=3697 Score = 82.4 bits (90), Expect = 5e-11 Identities = 143/203 (70%), Gaps = 4/203 (2%) Strand=Plus/Plus Query 33537 TAACACCAAATGTAGAGT-GCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCGTTCGT 33595 ||| |||||||||| ||| ||| ||||| | || || ||||| || | || | | ||| Sbjct 713 TAAAACCAAATGTAAAGTTGCT-TCTTTATAAATATTATAATCAGACAAGGTTCTTCCGT 771 Query 33596 CGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGT 33655 | |||| ||| ||||| ||||| | ||||| || ||||||| ||| | |||||||||| Sbjct 772 CCTCCAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGGAATGCCTTCTTTGT 831 Query 33656 CGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCGTGATC 33714 | ||||| || | |||| || | ||||| || | || || | || ||| Sbjct 832 CACGTATTTT-TGACTTGACATTTTCTATCGTGTCACTCCCCACGACCTCCAATGTAATC 890 Query 33715 GTTTTACCTGTTAACGTTTTTAC 33737 ||||| || || || ||||| || Sbjct 891 GTTTTCCCAGTCAATGTTTTGAC 913 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324688569809280