Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_028238.1 Length=188534 Score E Sequences producing significant alignments: (Bits) Value seq203241 98.7 1e-15 seq152430 93.3 5e-14 >seq203241 Length=2009 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891 || || ||||| ||| ||| || ||||| || |||||| | |||||| ||||||| ||| Sbjct 1721 GCTTTCTTTGGTGCAATGATCAACTCTTTCATTCATGTTGTTATGTATGGTTATTATGGA 1780 Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATC 32951 ||| | || | || || | ||| |||||| |||||||||||| ||||||||| || Sbjct 1781 TTATCTGCCCTTGGACCACACATGCAGAAATATTTATGGTGGAAAAGATATTTAACAATG 1840 Query 32952 ATACAATTG 32960 || |||||| Sbjct 1841 ATGCAATTG 1849 Score = 87.8 bits (96), Expect = 2e-12 Identities = 125/175 (71%), Gaps = 1/175 (1%) Strand=Plus/Plus Query 32656 TCAGAATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATA 32715 ||||| |||||| || || |||| | || | |||| || || ||||| |||||| Sbjct 1096 TCAGA-TAGCCAAGGCATTATGGTGGTTTTATTTCTCAAAGTGTTTAGAAATGTTAGATA 1154 Query 32716 CTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACC 32775 | || || || || || | |||||| |||||||||||| || || || ||||| || | Sbjct 1155 CAATATTTTTTGTATTGCGTAAGAAAAATAACCAAGTTAGTTTCTTACATGTATATCATC 1214 Query 32776 ATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || | | |||||| | || | ||||| || |||||||| | || || ||||| Sbjct 1215 ATGCTTCTATGTTTCCCCTATGGTGGATTGGAGTTAAATGGGTAGCTGGTGGACA 1269 >seq152430 Length=2559 Score = 93.3 bits (102), Expect = 5e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 32832 GCATTTTTTGGAGCACAGATAAATTCTTTTATACATGTTATAATGTATAGTTATTACGGA 32891 || || ||||| ||| ||| || ||||| || |||||| | |||||| ||||||| ||| Sbjct 1506 GCTTTCTTTGGTGCAATGATCAACTCTTTCATTCATGTTGTTATGTATGGTTATTATGGA 1447 Query 32892 TTAACAGCAATAGGTCCTTCCTTGCGAAAATATCTATGGTGGAAAAAATATTTAACTATC 32951 ||| | || | || || ||| |||||| |||||||||||| ||||||||| || Sbjct 1446 TTATCTGCCCTTGGACCACATATGCAGAAATATTTATGGTGGAAAAGATATTTAACAATG 1387 Query 32952 ATACAATTG 32960 || |||||| Sbjct 1386 ATGCAATTG 1378 Score = 91.5 bits (100), Expect = 2e-13 Identities = 126/175 (72%), Gaps = 1/175 (1%) Strand=Plus/Minus Query 32656 TCAGAATAGCCAGAGCCTTGTGGTTATATTTTATCTCTAAAGGTATAGAATATCTAGATA 32715 ||||| |||||| || || |||| | || | |||| || || ||||| |||||| Sbjct 2422 TCAGA-TAGCCAAGGCATTATGGTGGTTTTATTTCTCAAAGTGTTTAGAAATGTTAGATA 2364 Query 32716 CTATTTTCTTCATAATGAGAAAGAAATTTAACCAAGTTAGCTTTTTGCACGTATACCACC 32775 | || || || || || | |||||| ||||||||||||||| || || ||||| || | Sbjct 2363 CAATATTTTTTGTATTGCGTAAGAAAAATAACCAAGTTAGCTTCTTACATGTATATCATC 2304 Query 32776 ATTTTACCATGTTTACTTTAGGATGGATAGGGATTAAATGGTTTGCAGGAGGACA 32830 || | | |||||| | || | ||||| || |||||||| | || || ||||| Sbjct 2303 ATGCTTCTATGTTTCCCCTATGGTGGATCGGAGTTAAATGGGTAGCTGGTGGACA 2249 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595623442200160