Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq227251 140 3e-28 seq148027 118 9e-22 seq40568 118 9e-22 >seq227251 Length=1814 Score = 140 bits (154), Expect = 3e-28 Identities = 152/202 (75%), Gaps = 0/202 (0%) Strand=Plus/Plus Query 27016 GCAAGTCTATTACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAA 27075 |||| | || ||||| || || ||||| || || | ||||||| || ||| || | Sbjct 1 GCAAAACAATCACTCTAGAGGTTGAACCATCGGATACCATTGAGAATGTTAAAGCTAAGA 60 Query 27076 TTCAAGACAAAGAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAAT 27135 | |||||||| ||||| || ||||| ||||||||| | ||||| | ||| || |||||| Sbjct 61 TCCAAGACAAGGAAGGTATTCCACCAGATCAACAGAGATTAATCTTCGCAGGAAAACAAC 120 Query 27136 TGGAAGACAGTTCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGG 27195 | ||||| | ||| |||| |||||||||||||||||||| || || | ||| ||| Sbjct 121 TTGAAGATGGCAGGACTCTTTCAGATTACAACATTCAAAAGGAATCCACACTCCATCTGG 180 Query 27196 TTTTGCGTTTGCGGGGTGGCAT 27217 |||||||| | || ||||| || Sbjct 181 TTTTGCGTCTACGTGGTGGAAT 202 >seq148027 Length=2619 Score = 118 bits (130), Expect = 9e-22 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Minus Query 135648 TAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGT 135707 |||| || |||||||| ||||| ||| | || ||||||||||||||||| | || | | Sbjct 359 TAGGCTGCATGTGGTCAATTTGTGGTATCCATGATCAAGGATGGAAGGAAAGAGAAATTT 300 Query 135708 TTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTGT 135767 |||| || |||||||| ||||| ||||| ||||||| |||||||||| |||| | | Sbjct 299 TTGGAAAAATTCGCTACATGAATTATGATGGTTGTAAAAGAAAATTTGATGTTGCTGCTT 240 Query 135768 ACGTGAGAAAATATA 135782 ||| |||||||||| Sbjct 239 TCGTTAGAAAATATA 225 >seq40568 Length=5963 Score = 118 bits (130), Expect = 9e-22 Identities = 107/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 135648 TAGGTTGTATGTGGTCTATTTGCGGTGTACACGATCAAGGATGGAAGGAGCGCAAAGTGT 135707 |||| ||||||||||| ||||| ||| | || ||||||||||||||||| | || | | Sbjct 3975 TAGGCTGTATGTGGTCAATTTGTGGTATCCATGATCAAGGATGGAAGGAAAGAGAAATTT 4034 Query 135708 TTGGCAAGATTCGCTATATGAACTATGACGGTTGTACAAGAAAATTTAATGTAAATTTGT 135767 |||| || |||||||| ||||| ||||| ||||||| |||||||||| |||| | | Sbjct 4035 TTGGAAAAATTCGCTACATGAATTATGATGGTTGTAAAAGAAAATTTGATGTTGCTGCTT 4094 Query 135768 ACGTGAGAAAATATA 135782 || |||||||||| Sbjct 4095 TTGTTAGAAAATATA 4109 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429608621383262