Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_029997.1 Length=105667 Score E Sequences producing significant alignments: (Bits) Value seq227251 107 1e-18 seq92178 95.1 8e-15 >seq227251 Length=1814 Score = 107 bits (118), Expect = 1e-18 Identities = 135/183 (74%), Gaps = 2/183 (1%) Strand=Plus/Plus Query 23641 AAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTGA-AATATTAAAACAAAAAAT 23699 ||||| |||||||| || ||||| | |||| || |||| ||| ||||| | || | | Sbjct 3 AAAACAATCACTCTAGAGGTTGAACCATCGGATACCATTGAGAATGTTAAAGCTAAGA-T 61 Query 23700 TGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAATATTTGCCGGCAAACAACT 23759 ||||| |||||| | || |||||||||||| | ||||| || || || |||||||| Sbjct 62 CCAAGACAAGGAAGGTATTCCACCAGATCAACAGAGATTAATCTTCGCAGGAAAACAACT 121 Query 23760 GGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAGAGTCCACATTACATTTAGT 23819 ||||| | | ||| | ||||||||||| ||||| || |||||| | ||| | || Sbjct 122 TGAAGATGGCAGGACTCTTTCAGATTACAACATTCAAAAGGAATCCACACTCCATCTGGT 181 Query 23820 TTT 23822 ||| Sbjct 182 TTT 184 >seq92178 Length=3697 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 23621 TCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTTG 23680 |||| ||||| | || || |||||||| || | || || | | ||||| | | Sbjct 915 TCGTCAAAACATTGACTGGGAAAACGATTACATTGGAGGTCGTGGGGAGTGACACGATAG 856 Query 23681 AAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTTAA 23740 ||| | || |||||| |||||||||||| | ||| ||||||||| |||||| Sbjct 855 AAAATGTCAAGTCAAAAATACGTGACAAAGAAGGCATTCCGGAAGATCAACAACGTTTAT 796 Query 23741 TATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAAAG 23800 | ||||| || || |||||||| |||| | | || || ||||| || || | |||| Sbjct 795 TCTTTGCTGGAAAGCAACTGGAGGACGGAAGAACCTTGTCTGATTATAATATTTATAAAG 736 Query 23801 AGTCCACATTACATTTAGTTTTAAGGTTGCGA 23832 | | || |||||||| |||||||| || ||| Sbjct 735 AAGCAACTTTACATTTGGTTTTAAGATTTCGA 704 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 333880493105672