Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq227251 129 1e-24 seq1002334 107 5e-18 >seq227251 Length=1814 Score = 129 bits (142), Expect = 1e-24 Identities = 145/194 (75%), Gaps = 0/194 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || || || ||||| |||||||| ||||| | |||||||| | | ||| Sbjct 194 ACGTAGACGCAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGTAATCTGAAAGAGT 135 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||||| || || || || |||||||| | || ||||| || || |||||||| Sbjct 134 CCTGCCATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGATCTGGTGGAATACC 75 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 |||||||||||||||||| || ||| || ||||| || || | ||| || |||| Sbjct 74 TTCCTTGTCTTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATGGTTCAACCTCTAG 15 Query 225672 CGTGATCGTCTTGC 225685 ||||| || |||| Sbjct 14 AGTGATTGTTTTGC 1 >seq1002334 Length=1164 Score = 107 bits (118), Expect = 5e-18 Identities = 128/174 (74%), Gaps = 0/174 (0%) Strand=Plus/Minus Query 7551 CCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTAT 7610 |||| ||||||| ||||| | || || ||||| |||||||| |||||||| | || || Sbjct 984 CCAAATTTACAATGTTATCGTAACTGCCCATGCTTTTGTTATAATTTTCTTCATAGTAAT 925 Query 7611 GCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGA 7670 || | || || || || || ||||| ||| | || || |||| || || || || || Sbjct 924 ACCAATAATAATTGGAGGCTTTGGAAACTGACTTGTCCCACTAATAATCGGAGCCCCAGA 865 Query 7671 TATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTT 7724 ||| || || ||| | | || ||||||||||||||| | ||||| || || || Sbjct 864 TATAGCATTCCCACGAATAAATAATATAAGTTTTTGACTCCTACCACCATCATT 811 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177216232099796