Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq380849 237 1e-57 seq83784 132 4e-26 seq660234 96.9 3e-15 >seq380849 Length=1041 Score = 237 bits (262), Expect = 1e-57 Identities = 582/871 (67%), Gaps = 20/871 (2%) Strand=Plus/Plus Query 4263 TATTCGGATACTCGCTTTTCGAAGAAATTAGTTTTGCCTTCTAACGAAATATTTTCCATA 4322 || || | ||||| ||||| || ||||| | | |||| |||| ||||| |||||||| Sbjct 78 TACTCTGTTACTCTTTTTTCAAAAAAATTTGATCTGCCGTCTAGAGAAATGTTTTCCATG 137 Query 4323 AAATCAAACGGATTAGTTGCGTTGTAATG---TT--TTTCACACTTTAGAGCTACAAGCA 4377 || ||| ||||| |||| || ||| || |||| || || | | ||| || Sbjct 138 AACGAAAAGGGATTTTTTGCATTAAAATAAGCTTCGTTTCCCAATTGACA----CAA-CA 192 Query 4378 ATCGGTCAGCTACAAATTCTATATACTGGCTCATGAGTTCGCAGTTAATTCCAATTAATC 4437 || ||| | || ||||||||||| ||| || | || || ||||| || Sbjct 193 GTCTATCACCAACGTATTCTATATACGTTGACATTTTTTTTGAATTCATCCCAATCAAA- 251 Query 4438 TCACA-GGTAGCGCGTATGTCAAAAACTCTTGTTCTATAGTTACGGCTTCTGTGATTATA 4496 || || || | || | | ||||| || | ||| || | || ||| || || ||| Sbjct 252 TCGCATGGCAAAGCATTAATTAAAAAGTCCTTTTCAATTGCTATGGCATCAAGAATAATA 311 Query 4497 TCTTTTATTTTATCTTTAGATGGTTTATTTACTAAGTATCC---AAACAATAAACACGCA 4553 ||| | | |||||||| ||||| || | ||| | | ||| || || || ||| Sbjct 312 TCTCGAACGGTTTCTTTAGAAGGTTTGTTAATTAAATGGTCGTTAAATAACAAGCATGCA 371 Query 4554 AAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGAAAACGTTAATCCGGGC 4613 || || ||||||| ||||||||||| ||||| | |||||| ||||| | || Sbjct 372 AAGTCGCAATGCATCCCTTCGTCTCTACTAATTAATTCGTTGCTGGCAGTTAACGCTGGT 431 Query 4614 ATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCCAGAAAAGAATATGCCT 4673 | ||| ||||| ||||||| |||||| |||| ||||| |||||||| || || ||| Sbjct 432 AATAATCCTCTATTTTTAATCCAAAAAATAGACGCAAAGCTACCAGAAAAAAAAATACCT 491 Query 4674 TCTACGGCGGCAAACGCTACTAATCG-GGACCCGAACGAGCTGGCTTTGTCTTTAATCCA 4732 || || || ||||| || || | || || ||| || | || | || | ||||| Sbjct 492 TCAACCGCCGCAAAAGCCACAAGACGTTCTCCAAAACTCGCAGTCTCGGACTGT-ATCCA 550 Query 4733 TTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTATATAGCGTTAAATAA 4792 |||| ||| | || ||||| |||| || || || | ||| || |||||||| Sbjct 551 TTTTTTACTCCATTCCGCCTTTTTTTTAATTGTGGGCATAGTTTCTATTGCATTAAATAA 610 Query 4793 TTTACTTTTTTCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGA 4852 |||||| | | |||| ||| || | || |||| | ||||||| || || Sbjct 611 AAATTTTTTTTGCTTTCGATCTTTAATGTACGACTCAATTAACTGACTATACAACTCCGA 670 Query 4853 ATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAAC 4912 |||||| ||||| || | ||||||||| ||||| | | || || ||| || Sbjct 671 ATGTATGTTTTCCATCATCACCTGAAATCCATAAAAAACTTTTGCCTCCAAGTATTGGAC 730 Query 4913 TTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAA 4972 ||| || |||| | ||| |||| ||||| || ||||| || ||||||||||||||||| Sbjct 731 TTCTTTGGAAAACCGTTCAACTATATTTTCATTAACTATGCCATCACTGGCTGCAAAAAA 790 Query 4973 CGCCAAAACATGAGATATAAAGTACTGTTCGTCA-GGCTTAAGT--TTTTTCCAGTGGGG 5029 |||||||| ||||||||||| | |||| | | |||| | |||||||| || Sbjct 791 AGCCAAAACGTGAGATATAAATTTTCGTTCTTTATCATTTAAATCATTTTTCCAATGCAC 850 Query 5030 CAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTA 5089 | ||| ||| ||||| | |||||||| |||||||| ||||| | |||| || Sbjct 851 GATGTCTGTAGAAAAATCCAGCTCTTCAACCGTCCAAAAACTAGCTTCTGTCCTTTTATA 910 Query 5090 CATAGACCAAATATCAGGATACTGAATCGGA 5120 ||| ||| || ||| ||| || || ||| Sbjct 911 CATGTTCCATATGTCATGATGTTGTATAGGA 941 >seq83784 Length=3932 Score = 132 bits (146), Expect = 4e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 4931 TACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATAT 4990 ||| |||||||| ||||| || || ||||| |||||||| || |||| ||||| || || Sbjct 3848 TACCAAGTTTTCATTTACAATGCCATCACTAGCTGCAAAGAAAGCCAGGACATGTGAAAT 3789 Query 4991 AAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAAC 5050 ||| | | || ||| || || | |||||| | |||||||| ||||||||| Sbjct 3788 AAAATGTTTCTCCTCATCTTTCAGAGCGTCCCAGTGAATGAGATCTTTAGATAAATCAAC 3729 Query 5051 TTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACATAGACCAAATATCAGGATA 5110 ||||||| | ||||| || || ||||| ||||| |||||||| |||||| ||| |||| Sbjct 3728 TTCTTCAGCTGTCCAGAAGGAGGCTTCTGCTTTCTTGTACATTTTCCAAATGTCATGATA 3669 Query 5111 CTGAATCGGAAGTATGACAAATC 5133 || ||| || | | ||||||| Sbjct 3668 CTCAATGGGGAAGACAACAAATC 3646 >seq660234 Length=515 Score = 96.9 bits (106), Expect = 3e-15 Identities = 97/126 (77%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 4808 TGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTTTCTAT 4867 ||| || | ||| || || || |||| | ||| |||||||||||||| || || || || Sbjct 268 TGGATCCTTAATGTATGTATCAATTAACAAGCTGTACATTTCAGAATGAATGTTCTCCAT 209 Query 4868 AGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCT 4927 || ||||| ||||| || || || || || ||||| |||||||||| |||| ||||| Sbjct 208 TGCTATCTGGAATCCATAGAAACACCTTGCCTCTGTAGCTTGAACTTCCTTACTGAATCT 149 Query 4928 TTCTAC 4933 |||||| Sbjct 148 TTCTAC 143 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421832785307222