Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq227251 140 7e-28 seq92178 91.5 3e-13 >seq227251 Length=1814 Score = 140 bits (154), Expect = 7e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || | |||||||| | ||| ||| ||||| |||||||| || | | Sbjct 199 CCACCACGTAGACGCAAAACCAGATGGAGTGTGGATTCCTTTTGAATGTTGTAATCTGAA 140 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||| || |||||||| || || ||||| || | ||||| || ||| Sbjct 139 AGAGTCCTGCCATCTTCAAGTTGTTTTCCTGCGAAGATTAATCTCTGTTGATCTGGTGGA 80 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 ||||| ||||||||||||||||| ||||| || | || || || ||||| | ||| || Sbjct 79 ATACCTTCCTTGTCTTGGATCTTAGCTTTAACATTCTCAATGGTATCCGATGGTTCAACC 20 Query 283053 TCGAGAGTGATCGTCTT 283069 || |||||||| || || Sbjct 19 TCTAGAGTGATTGTTTT 3 >seq92178 Length=3697 Score = 91.5 bits (100), Expect = 3e-13 Identities = 146/207 (71%), Gaps = 2/207 (1%) Strand=Plus/Plus Query 282891 ACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAG-CAAGCGTGCGGCCATCCTC 282949 |||| |||||| || |||||| | || || || |||| |||| || | || ||||| Sbjct 717 ACCAAATGTAAAGTTGCTTCTTTATAAATATTATAATCAGACAAG-GTTCTTCCGTCCTC 775 Query 282950 TAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTG 283009 ||||| || || ||||||| ||||||||||| || ||||||| || || ||||| | Sbjct 776 CAGTTGCTTTCCAGCAAAGAATAAACGTTGTTGATCTTCCGGAATGCCTTCTTTGTCACG 835 Query 283010 GATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTT 283069 || |||| || || | || || ||||| | |||| || | || ||||| || Sbjct 836 TATTTTTGACTTGACATTTTCTATCGTGTCACTCCCCACGACCTCCAATGTAATCGTTTT 895 Query 283070 ACCCGTCAAAGTCTTAACGAATATCTG 283096 || ||||| || || |||| ||| || Sbjct 896 CCCAGTCAATGTTTTGACGAGTATTTG 922 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1033296551918436