Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mytilus_20galloprovincialis_20[genbank_20GCA_5F001676915.1_202017- 03-16] 1,002,334 sequences; 1,500,149,602 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq92178 86.0 1e-11 >seq92178 Length=3697 Score = 86.0 bits (94), Expect = 1e-11 Identities = 159/228 (70%), Gaps = 8/228 (4%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| |||| ||||| | || || |||||||| || | ||||| | | ||| Sbjct 922 CAAATACTCGTCAAAACATTGACTGGGAAAACGATTACATTGGAGGTCGTGGGGAGTGAC 863 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || ||||| ||| || | ||||||||||| || |||||| | ||| Sbjct 862 ACGATAGAAAATGTCAAGTCAAAAATACGTGACAAAGAAGGCAT---TCCGGAAGATCAA 806 Query 178044 CGAC--TTA-TCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTG-CCGATTATAA 178099 | || ||| |||| || ||||| || || || || ||||| || |||| | |||||||| Sbjct 805 CAACGTTTATTCTTTGCTGGAAAGCAACTGGAGGACGGAAGAAC-CTTGTCTGATTATAA 747 Query 178100 CGTCCAAAAAGAATCAACACTGCATCTTGTTTTGAGACTCAGATAAAA 178147 | | |||||| |||| | ||| | ||||| ||| | ||| ||| Sbjct 746 TATTTATAAAGAAGCAACTTTACATTTGGTTTTAAGATTTCGATCAAA 699 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1188272397170796