Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq10787 86.0 1e-11 seq10759 86.0 1e-11 seq10640 86.0 1e-11 >seq10787 Length=1522163 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||||||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 807794 GCCCGTCTAGCTCAGTCGGTAGAGCATGGGACTGTTAATCCCAGGGTCGTGGGTTCGAGC 807735 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 807734 CCCACGTTGGGC 807723 >seq10759 Length=1189085 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| |||| ||||||| |||||||||||||||| Sbjct 296969 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 296910 Query 165770 CCCACGATGGGC 165781 |||||| ||||| Sbjct 296909 CCCACGTTGGGC 296898 >seq10640 Length=514608 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Plus Query 165710 GCCCGTCTAGCTCAGTCGGTAGAGCGCCAGACTTTTAATCTGGTGGTCGTGGGTTCGAGC 165769 ||||| ||||||||||||||||||| |||| |||||| |||||||||||||||| Sbjct 30265 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCCCAGGGTCGTGGGTTCGAGC 30324 Query 165770 CCCACGATGGGC 165781 |||||||||||| Sbjct 30325 CCCACGATGGGC 30336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057677569390520