Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_001973.1 Length=161046 Score E Sequences producing significant alignments: (Bits) Value seq10493 134 1e-26 seq10485 129 6e-25 seq10777 111 2e-19 seq10743 93.3 4e-14 >seq10493 Length=264610 Score = 134 bits (148), Expect = 1e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 40687 AAAATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCC 40746 || ||||| || || || || || || || || ||||||||||| | || |||||| | Sbjct 49280 AACATGCAGATCTTTGTGAAGACTCTGACCGGAAAAACCATCACTTTAGAGGTCGAACCG 49339 Query 40747 ACCGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGAC 40806 | ||| | | ||| | |||| ||||||| |||||||| ||||| || | ||| Sbjct 49340 AGCGATACGATCGAAAATGTGAAGGCGAAAATTCAGGACAAAGAAGGCATTCCGCCCGAC 49399 Query 40807 CAGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 40866 || ||| |||| |||| ||| ||||| || || || |||| ||||| || | |||||| Sbjct 49400 CAACAAAGACTTATCTTCGCCGGCAAGCAACTCGAAGACGGACGCACACTGAGTGACTAC 49459 Query 40867 AACATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||||| |||| || ||||| || Sbjct 49460 AACATCCAGAAGGAGTCCACACTTCATCTGGT 49491 Score = 127 bits (140), Expect = 2e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| ||||| || || |||||||| | || || ||| | | Sbjct 50194 AATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50253 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 50254 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50313 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| ||||| || || || |||| ||||| || | ||||||||| Sbjct 50314 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50373 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 50374 CATCCAGAAGGAGTCCACACTTCATCTGGT 50403 Score = 123 bits (136), Expect = 3e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || || |||||||| | || || ||| | | Sbjct 50422 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50481 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 50482 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50541 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| ||||| || || || |||| ||||| || | ||||||||| Sbjct 50542 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50601 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGCTTGAGGGGCGG 40916 ||||||||||||| |||| || ||||| || | || |||| || || Sbjct 50602 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTGAGAGGAGG 50649 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || || |||||||| | || || ||| | | Sbjct 49738 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 49797 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 49798 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 49857 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| ||||| || || || |||| ||||| || | ||||||||| Sbjct 49858 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 49917 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 49918 CATCCAGAAGGAGTCCACACTTCATCTGGT 49947 Score = 122 bits (134), Expect = 9e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || || |||||||| | || || ||| | | Sbjct 49966 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50025 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 50026 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50085 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| ||||| || || || |||| ||||| || | ||||||||| Sbjct 50086 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50145 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 50146 CATCCAGAAGGAGTCCACACTTCATCTGGT 50175 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| || || ||||| || || |||||||| | || || ||| | | Sbjct 49510 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 49569 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 49570 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 49629 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 |||| | | |||| ||| ||||| || || || |||| ||||| || | |||||||| Sbjct 49630 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAA 49689 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 49690 CATCCAGAAGGAGTCCACACTTCATCTGGT 49719 Score = 113 bits (124), Expect = 5e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 |||||| || ||||| ||||| ||||| || || |||||||| | || || ||| | | Sbjct 50650 AATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50709 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 |||| | | | | || | || || | ||||||||||| ||||| | ||||| Sbjct 50710 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50769 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || | | |||| || ||||| || || || |||| ||||| || | ||||||||| Sbjct 50770 ACAGAGGTTGATCTTTGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50829 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||||||| |||| || ||||| || Sbjct 50830 CATCCAGAAGGAGTCCACACTTCATCTGGT 50859 >seq10485 Length=261005 Score = 129 bits (142), Expect = 6e-25 Identities = 151/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || || || || ||||||||||| | || || ||| | | Sbjct 97661 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97720 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | || | ||||||| ||||| || ||||| ||| | ||||| Sbjct 97721 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 97780 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 ||||||||||||| ||| || |||||||| || || | || ||||| | ||||||||| Sbjct 97781 ACAACGACTCATCTTCGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGCGACTACAA 97840 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| | || || || Sbjct 97841 CATCCAGAAAGAGTCGACTCTTCA 97864 Score = 111 bits (122), Expect = 2e-19 Identities = 147/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || || || || || || ||||||||||| | || || ||| | | Sbjct 97889 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97948 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||||| | | | | || | ||||||| ||||| || ||||| ||| | ||||| Sbjct 97949 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 98008 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || |||||| ||| || ||||| || || || | || ||||| | ||||||||| Sbjct 98009 ACAGCGTTTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGCGACTACAA 98068 Query 40869 CATCCAGAAGGAGGCCACGCTGCA 40892 ||||||||| ||| | || || || Sbjct 98069 CATCCAGAAAGAGTCGACTCTTCA 98092 Score = 109 bits (120), Expect = 6e-19 Identities = 150/210 (71%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 40689 AATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCAC 40748 ||||||||| || || ||||| ||||| ||||| || |||||| | || || || | | Sbjct 97433 AATGCAAATCTTTGTGAAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGAGCCTAG 97492 Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808 ||| | | ||| | || | ||||||| ||||| || ||||| ||| | ||||| Sbjct 97493 CGATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 97552 Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868 || || | || | ||| || ||||| || || || | || ||||| | ||||||||| Sbjct 97553 ACAGCGTTTAATTTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGCGACTACAA 97612 Query 40869 CATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 ||||||||| ||| | || || || || || Sbjct 97613 CATCCAGAAAGAGTCGACCCTTCACCTGGT 97642 >seq10777 Length=1546546 Score = 111 bits (122), Expect = 2e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749 |||||||| || || ||||| ||||| || ||||| |||||| | || ||||| | | Sbjct 767466 ATGCAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACCCTAGAAGTCGAGCCTAGT 767525 Query 40750 GACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCAG 40809 |||| | | | | || | ||||||| ||||| || ||||| ||| | ||||| Sbjct 767526 GACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCAA 767585 Query 40810 CAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAAC 40869 || || | || | ||| || |||||||| || || | || ||||| | |||||||||| Sbjct 767586 CAGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAACCCTAAGCGACTACAAC 767645 Query 40870 ATCCAGAAGGAGGCCACGCTGCATCTAGT 40898 |||||||| ||| | || || || || || Sbjct 767646 ATCCAGAAAGAGTCGACCCTTCACCTGGT 767674 >seq10743 Length=1036592 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || |||| || || || |||||||| ||||||||||| || ||||| || ||| | Sbjct 63610 GCATGTATTGGCATTCTTTGCGGCCAGCGATGGCATCGTCAATGAAAATCTTGTAGAGTG 63551 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| || || ||| | | ||||| |||||||||||||||| ||||| || || Sbjct 63550 CTTCTGTCAAGAAGTACAGATTCCTGAGGCCAGGTGCTTCTACGGCTTCCAGATTGCTAT 63491 Query 116872 GGAG 116875 ||| Sbjct 63490 TGAG 63487 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || |||| || || || |||||||| ||||||||||| || ||||| || ||| | Sbjct 76403 GCATGTATTGGCATTCTTTGCGGCCAGCGATGGCATCGTCAATGAAAATCTTGTAGAGTG 76462 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| || || ||| | | ||||| |||||||||||||||| ||||| || || Sbjct 76463 CTTCTGTCAAGAAGTACAGATTCCTGAGGCCAGGTGCTTCTACGGCTTCCAGATTGCTAT 76522 Query 116872 GGAG 116875 ||| Sbjct 76523 TGAG 76526 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || |||| || || || |||||||| ||||||||||| || ||||| || ||| | Sbjct 89651 GCATGTATTGGCATTCTTTGCGGCCAGCGATGGCATCGTCAATGAAAATCTTGTAGAGTG 89710 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| || || ||| | | ||||| |||||||||||||||| ||||| || || Sbjct 89711 CTTCTGTCAAGAAGTACAGATTCCTGAGGCCAGGTGCTTCTACGGCTTCCAGATTGCTAT 89770 Query 116872 GGAG 116875 ||| Sbjct 89771 TGAG 89774 Score = 93.3 bits (102), Expect = 4e-14 Identities = 95/124 (77%), Gaps = 0/124 (0%) Strand=Plus/Minus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || |||| || || || |||||||| ||||||||||| || ||||| || ||| | Sbjct 108424 GCATGTATTGGCATTCTTTGCGGCCAGCGATGGCATCGTCAATGAAAATCTTGTAGAGTG 108365 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| || || ||| | | ||||| |||||||||||||||| ||||| || || Sbjct 108364 CTTCAGTCAAGAAGTACAGATTCCTGAGGCCAGGTGCTTCTACGGCTTCCAGATTGCTAT 108305 Query 116872 GGAG 116875 ||| Sbjct 108304 TGAG 108301 Score = 89.7 bits (98), Expect = 5e-13 Identities = 94/124 (76%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 116752 GCACGTGCTGGCCTTTTTCGCCGCCAGCGACGGCATCGTCAACGAGAATCTGGTCGAGCG 116811 ||| || |||| || || || |||||||| ||||||||||| || ||||| || ||| | Sbjct 81296 GCATGTATTGGCATTCTTTGCGGCCAGCGATGGCATCGTCAATGAAAATCTTGTAGAGTG 81355 Query 116812 TTTCGCTCAGGAGGTGCAGGTGGCCGAGGCGCGGTGCTTCTACGGCTTTCAGATCGCCAT 116871 ||| ||| || || ||| | | ||||| | |||||||||||||| ||||| || || Sbjct 81356 CTTCAGTCAAGAAGTACAGATTCCTGAGGCCAGATGCTTCTACGGCTTCCAGATTGCTAT 81415 Query 116872 GGAG 116875 ||| Sbjct 81416 TGAG 81419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 515149619647040