Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq10493 102 5e-17 seq10485 98.7 6e-16 seq10777 95.1 8e-15 >seq10493 Length=264610 Score = 102 bits (112), Expect = 5e-17 Identities = 137/191 (72%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 34199 TCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAA 34258 || ||||| ||||||||||| ||| || |||| || | |||||||| ||||| Sbjct 49473 TCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAG 49414 Query 34259 ATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCG 34318 || || | || |||||| || | || || ||||| || || ||| | || Sbjct 49413 ATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTT 49354 Query 34319 GCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACA 34378 | |||| |||| ||| |||||| || | ||||||||||| ||||| ||||| |||||| Sbjct 49353 TCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACA 49294 Query 34379 AAGATCTGCAT 34389 ||||||||||| Sbjct 49293 AAGATCTGCAT 49283 >seq10485 Length=261005 Score = 98.7 bits (108), Expect = 6e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||||||| | || |||||||| |||||||||||| ||| ||| | || Sbjct 97645 AGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCT 97586 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | || || || |||||||| | ||||| ||||| ||| | || |||||||| Sbjct 97585 TCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 97526 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | || | |||| |||| | | || || || | ||||| || Sbjct 97525 TGAAT-TTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGT 97467 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||||| ||||| |||||||||||||| ||||| Sbjct 97466 CTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 97434 Score = 93.3 bits (102), Expect = 3e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| |||||||| |||||||||||| || ||| | || Sbjct 97873 AGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCT 97814 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | ||| || || ||||| ||||| || || ||||| ||| | || |||||||| Sbjct 97813 TCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 97754 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | || | || | ||| | | ||| || || | |||||||| Sbjct 97753 TGAAT-TTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGT 97695 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| ||||| || || ||||||||||| ||||| Sbjct 97694 TTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 Score = 89.7 bits (98), Expect = 3e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 34178 AGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGACAGCTGACGGTCGTCG 34237 || |||| ||| | ||| |||||||| |||||||||||| || ||| | || Sbjct 98101 AGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCT 98042 Query 34238 TCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGGCACGCTCTCCTTGTCG 34297 || | || || || ||||| |||| ||||| ||||| ||| | || |||||||| Sbjct 98041 TCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 97982 Query 34298 GCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCGACGTCCACCGTGATGGT 34356 || ||| ||||| | || | || | ||| | | ||| || || | |||||||| Sbjct 97981 TGAAT-TTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGT 97923 Query 34357 TTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 ||| ||||| || || ||||||||||| ||||| Sbjct 97922 TTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97890 >seq10777 Length=1546546 Score = 95.1 bits (104), Expect = 8e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||||||| | || |||||||| |||||||||||| Sbjct 767693 TCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCT 767634 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTCGACGGG 34281 || ||| | || || | ||| || || |||||||| | ||||| ||||| ||| Sbjct 767633 TAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGG 767574 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGC-TTTAGATCGGCTATCGAATCGGTCGATTCGA 34340 | || |||||||| || ||| || |||| || | |||| || | | |||| Sbjct 767573 AATGCCTTCCTTGTCTTGAAT-TTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGA 767515 Query 34341 CGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 | || | ||||| ||||| || ||||| |||||||||||||| ||||| Sbjct 767514 CTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323029459898240