Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq10801 84.2 2e-11 >seq10801 Length=2783716 Score = 84.2 bits (92), Expect = 2e-11 Identities = 120/168 (71%), Gaps = 1/168 (1%) Strand=Plus/Plus Query 20200 TTTGACA-ACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTT 20258 |||| || | ||| | || || ||| | || || |||||||| || || ||| | ||||| Sbjct 1367138 TTTGTCACATCGTGAGGAAGGTGATCTTGGACCAGTGTATGGTTTCCAGTGGCGGCATTT 1367197 Query 20259 TGGAGCTGAATATGTTGACATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACA 20318 ||| || |||||||||||||| ||||| | || |||||| || || || || | Sbjct 1367198 TGGTGCCAAATATGTTGACATGCACACAGACTACACTGGACAGGGTGTTGACCAGCTGGC 1367257 Query 20319 AAATGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTAT 20366 | |||||| | |||||| | |||||| | |||||| | ||||| Sbjct 1367258 TCAGGTTATTGACAAAATTAAGAATAACCCAGATGACAGACGCATTAT 1367305 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399131437945780