Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_003027.1 Length=150773 Score E Sequences producing significant alignments: (Bits) Value seq8589 178 1e-39 >seq8589 Length=14632 Score = 178 bits (196), Expect = 1e-39 Identities = 397/589 (67%), Gaps = 19/589 (3%) Strand=Plus/Plus Query 14207 GCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGTTTGAAAATGTTAATCCT 14266 |||||||||||||| | || ||||| | | ||| | ||||| ||||||||||| || Sbjct 5798 GCAAAATCACAATGCACTCCTTCATCACGAGAAATTAACTCGTTAGAAAATGTTAAACCA 5857 Query 14267 GGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATGATCCGGAAAAGAATATT 14326 ||||| || |||| ||| ||||||||||| || | | || | ||| || ||||||||| Sbjct 5858 GGCATTAACCCTCTTTTCTTTAACCAAAAAATAGAACAAAACGCTCCTGAGAAGAATATT 5917 Query 14327 CCCTCAACTGCAGCAAACGCTATTAATCGTTCTCCAAACGATGCTTTTTTGTTCGATATC 14386 || || || || ||||| || || | || ||| |||| || | | ||| Sbjct 5918 CCTTCCACAGCTGCAAATGCGATAAGTCTTTCAGCAAAAGA------ATCAGACTCAATC 5971 Query 14387 CATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATTGTTTCAATAGCATTAAAT 14446 |||||| |||||||| | |||| |||| || | ||||||||||| ||| Sbjct 5972 CATTTTAATGCCCATTCTGCTTTTCTTTTTATTGCTGGAAACACTTCAATAGCATGGAAT 6031 Query 14447 AAATGTTCCTTCTCT--TTAGTACTTGAAATGTATGTATCAATAAGTAAGCTATACATTT 14504 || | || |||||| | | || | | || |||||||| | | ||| ||| Sbjct 6032 AATTTATCTTTCTCTACCTCATCTTTCACA--TAAGTATCAATCAAAAGAGAATAGGTTT 6089 Query 14505 CAGAGTGTATGTTTTCCATAGCTATCTGAAAACCATAAAAACATCTAGCTTCTGACCATT 14564 | || || || ||||| || ||||| ||||| ||| || ||||||| | ||| Sbjct 6090 CGCTATGAATATTCTCCATCATAATTTGAAATCCATAGAAAAATTTAGCTTCGGCATATT 6149 Query 14565 GTACCTC-TGAGTAAAATCTTTCGGCCAAATTTTCATTAACTATACCATCACTAGCTGCA 14623 | || || | | ||||| |||| || ||||||||||| || || || ||| || ||| Sbjct 6150 GCACTTCATTAACAAAAT-TTTCTGCTAAATTTTCATTCACAATCCCGTCAGATGCAGCA 6208 Query 14624 AAAAATGCCAATATGTTTTTAATAAAGTA---TTGCTCTTCATTGCTGAGTT--TTTTCC 14678 ||||| || || || | |||||||| || || |||||||| | | || | |||| Sbjct 6209 AAAAAAGCTAAAATATGCTTAATAAAATATTTTTCATCTTCATT--TAATTTCGTGTTCC 6266 Query 14679 AATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAAAACTAGCAACAGCTT 14738 | || | | ||| | | | ||||| ||| ||| | ||||||||||| || | || Sbjct 6267 AGTCTGTGATATCTTGATGCAAATCTATTTCTTCAGCAGTCCAAAAACTTGCCTCCATTT 6326 Query 14739 TTTTATACATTACCCATATTTCTTTATATAATATAGGAAAAACTACAAA 14787 |||| ||| | |||| || || | || || ||||||| ||||| Sbjct 6327 TTTTGTACCATTCCCAAATATCATGATGCTTAATTGGAAAAATGACAAA 6375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 482280459226720