Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_003083.1 Length=118584 Score E Sequences producing significant alignments: (Bits) Value seq10485 96.9 3e-15 seq10777 95.1 9e-15 seq10493 93.3 3e-14 >seq10485 Length=261005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/230 (70%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | || |||| |||||| || || ||||| || |||||||||||| Sbjct 97889 TCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCT 97830 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | |||||| | ||||| || || |||| |||| |||||| || ||| Sbjct 97829 AAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGG 97770 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||| || ||||| | || || || | | | ||||| | || || Sbjct 97769 AATGCCTTCCTTGTCTTGAATTT-TAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAA 97711 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 ||| | |||||| |||| ||||||| || || ||||| ||||||||| Sbjct 97710 CTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97661 Score = 95.1 bits (104), Expect = 9e-15 Identities = 164/236 (69%), Gaps = 2/236 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| | || | || |||| |||||| || || ||||| || |||||||||||| Sbjct 97661 TCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCT 97602 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | |||||| | |||||| || || | || | | ||||| || ||| Sbjct 97601 CAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGG 97542 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||| || ||||| | || || || | | | | || || | ||||| Sbjct 97541 AATGCCTTCCTTGTCTTGAATTT-TAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAA 97483 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTTTAAA 18332 ||| | |||||| | ||||| || | |||||| ||||| ||||||||| | ||| Sbjct 97482 CTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATTATGAAA 97427 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/238 (69%), Gaps = 3/238 (1%) Strand=Plus/Minus Query 18090 TTTTGTTATCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTG 18149 ||| ||| |||||| | || | || |||| |||||| || || ||||| || |||||| Sbjct 98124 TTTAGTT-TCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTG 98066 Query 18150 TAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGA 18209 |||||| | ||| | |||||| | |||||| || || |||| | | ||||| Sbjct 98065 TAGTCGCTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGG 98006 Query 18210 TCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACC 18268 || ||| | ||||||||| || ||||| | || || || | | | ||||| | Sbjct 98005 TCTGGGGGAATGCCTTCCTTGTCTTGAATTT-TAGCTTTCACATTCTCGATTGTGTCGCT 97947 Query 18269 GGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATT 18326 || || ||| | |||||| |||| ||||||| || || ||||| ||||||||| Sbjct 97946 TGGTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97889 >seq10777 Length=1546546 Score = 95.1 bits (104), Expect = 9e-15 Identities = 160/229 (70%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || | || |||| |||||| || || ||||| || |||||||||||| Sbjct 767693 TCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCT 767634 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 | ||| | |||||| | ||||| || || | || | | ||||| || ||| Sbjct 767633 TAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGG 767574 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGC-TTGACCTGTGCAACAGTGTCACCGGGCTCGG 18276 | ||||||||| || ||||| | || || || | | | ||||||| |||||| Sbjct 767573 AATGCCTTCCTTGTCTTGAATTT-TCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGA 767515 Query 18277 TTTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325 ||| | |||||| |||| || || | |||||| ||||| |||||||| Sbjct 767514 CTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 >seq10493 Length=264610 Score = 93.3 bits (102), Expect = 3e-14 Identities = 159/231 (69%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 18098 TCCTCCCCGTAGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGC 18157 |||||| || || | || |||| |||||||| || || || || ||||||||||| Sbjct 49510 TCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACT 49451 Query 18158 CATTGTTTTACAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGG 18217 || ||| | ||||| | ||| ||||| || |||||||||||||||| || || Sbjct 49450 CAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGG 49391 Query 18218 CACGCCTTCCTTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGT 18277 | |||||| || || ||||| ||| || | | | | || || | || ||| Sbjct 49390 AATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGAC 49331 Query 18278 TTCAATGGTGATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328 || | |||||| |||| ||||||| || || ||||| || ||||| || Sbjct 49330 CTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCATGTT 49280 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 379294050352980