Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq9558 84.2 2e-11 >seq9558 Length=35122 Score = 84.2 bits (92), Expect = 2e-11 Identities = 126/179 (70%), Gaps = 0/179 (0%) Strand=Plus/Minus Query 21018 GTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCGAGGCCCATGTCGGCGGACCTC 21077 ||||| | ||||||||||||||||| || || || || ||| ||||| ||| | | Sbjct 404 GTCAGCAATGCGTAGCTGGCGATGTTGAAGGGAACGCCCAGGAAGATGTCCGCGCTGCGC 345 Query 21078 TGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAAAACTGACACAAAACGTGACAA 21137 |||||||||||||| |||| || ||||| || ||||| | || |||| || Sbjct 344 TGGTACAGCTGGCAACTGAGCTTGCCGTCGGCCACATAGAACTGGAAGAAGGCGTGGCAG 285 Query 21138 GGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCACGCGCACATAACGATGCGCCG 21196 || ||| |||||| ||| ||||| || |||||| |||| | | |||||| || Sbjct 284 GGCATGAGCGCCATCTGCGGCAGGTCGGCCACGTTCCAGGCGCTGACGATGATGCGGCG 226 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427719673129920