Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq10493 141 7e-29 seq10485 129 4e-25 >seq10493 Length=264610 Score = 141 bits (156), Expect = 7e-29 Identities = 161/216 (75%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 15151 TAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTC 15210 || ||| | |||||| ||||| || || || |||||||| || || || | | |||| Sbjct 49495 TAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTC 49436 Query 15211 TTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTC 15270 ||| | ||| ||||| ||| | || | | |||||||||| ||||| ||||||||||| Sbjct 49435 TTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTC 49376 Query 15271 ACAAATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGT 15330 |||||| ||| ||| |||| || |||||||| ||| || ||||| || ||||| Sbjct 49375 CTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGT 49316 Query 15331 TTTACCTGTCAGAGTTTTTACAAAAATTTGCATATT 15366 ||| || |||||||| || ||||| || ||||| || Sbjct 49315 TTTTCCGGTCAGAGTCTTCACAAAGATCTGCATGTT 49280 >seq10485 Length=261005 Score = 129 bits (142), Expect = 4e-25 Identities = 167/228 (73%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 15137 CCACCTCTCAATCTTAAAACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTT 15196 || ||||| | | || ||| || ||||| || || ||||| || |||||||| ||||| Sbjct 97888 CCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTA 97829 Query 15197 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGA 15256 || ||| | ||||||| ||||| || ||| | || | ||||||||||| ||| Sbjct 97828 AGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGA 97769 Query 15257 ATTCCTTCTTTGTCACAAATTTT-GCTCTTTACAATTTCTATGGTATCGCTATTTTCTAC 15315 || ||||| ||||| |||||| ||| || ||| | || || || ||||| ||| || Sbjct 97768 ATGCCTTCCTTGTCTTGAATTTTAGCT-TTCACATTCTCGATTGTGTCGCTTGGTTCAAC 97710 Query 15316 ATCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 |||| || |||||||| || ||||| || || ||||| |||||||| Sbjct 97709 TTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362131510506564