Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_008603.1 Length=321240 Score E Sequences producing significant alignments: (Bits) Value seq10167 87.8 4e-12 seq10787 86.0 1e-11 seq10766 86.0 1e-11 seq10759 86.0 1e-11 seq9815 86.0 1e-11 >seq10167 Length=12553 Score = 87.8 bits (96), Expect = 4e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 142057 CTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCC 142115 |||||||||||||||| |||| |||||||||||||||||||||||| |||||||| ||| Sbjct 1303 CTGTGGCGCAATGGACTAGCGTGTTGGACTTCTAATCCAAAGGTTGTGGGTTCGAGTCCC 1362 Query 142116 GCCAG 142120 |||| Sbjct 1363 ACCAG 1367 >seq10787 Length=1522163 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||| | |||||||||||||||| Sbjct 862210 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCAAAGGGTCGTGGGTTCGAGC 862151 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 862150 CCCACGTTGGGC 862139 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| ||||||||||| | |||||||||||||||| Sbjct 900142 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCAAAGGGTCGTGGGTTCGAGC 900083 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 900082 CCCACGTTGGGC 900071 >seq10766 Length=1241374 Score = 86.0 bits (94), Expect = 1e-11 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Minus Query 142057 CTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCCCC 142115 |||||||||||||||| |||| |||||||||||||| ||||||||| |||||||| ||| Sbjct 207630 CTGTGGCGCAATGGACTAGCGTGTTGGACTTCTAATTCAAAGGTTGTGGGTTCGAGTCCC 207571 Query 142116 GCCAGAG 142122 |||||| Sbjct 207570 ACCAGAG 207564 >seq10759 Length=1189085 Score = 86.0 bits (94), Expect = 1e-11 Identities = 62/72 (86%), Gaps = 0/72 (0%) Strand=Plus/Minus Query 142504 GCCCGGTTAGCTCAGTCGGTAGAGCGCTAGACTCTTAATCTAGTGGTCGTGGGTTCGAGC 142563 |||||| |||||||||||||||||| |||||||||||| |||||||||||||||| Sbjct 296969 GCCCGGCTAGCTCAGTCGGTAGAGCATGGGACTCTTAATCTCAGGGTCGTGGGTTCGAGC 296910 Query 142564 CCCACATCGGGC 142575 ||||| | |||| Sbjct 296909 CCCACGTTGGGC 296898 >seq9815 Length=12474 Score = 86.0 bits (94), Expect = 1e-11 Identities = 60/67 (90%), Gaps = 1/67 (1%) Strand=Plus/Plus Query 142055 CTCTGTGGCGCAATGGAC-AGCGCGTTGGACTTCTAATCCAAAGGTTGCGGGTTCGACCC 142113 |||||||||||||||||| |||| |||||||||||||| ||||||||| |||||||| | Sbjct 2173 CTCTGTGGCGCAATGGACTAGCGTGTTGGACTTCTAATTCAAAGGTTGTGGGTTCGAGTC 2232 Query 142114 CCGCCAG 142120 || |||| Sbjct 2233 CCACCAG 2239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027694520406164