Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq10485 190 4e-43 seq10493 181 2e-40 seq10777 154 3e-32 seq10646 104 4e-17 seq10338 104 4e-17 seq10391 98.7 2e-15 seq10798 93.3 8e-14 >seq10485 Length=261005 Score = 190 bits (210), Expect = 4e-43 Identities = 180/230 (78%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||||||| || || |||||||| |||||||| || ||| Sbjct 97890 TTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGC 97831 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | |||||||||| ||| || |||||||| ||||||| ||||||||| || | Sbjct 97830 TAAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGG 97771 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||||||||||||||||||||| || || || || |||||| ||||| || ||| | Sbjct 97770 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAA 97711 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 |||| | ||||||||||| || || |||||||| || || || |||||| Sbjct 97710 CTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97661 Score = 174 bits (192), Expect = 3e-38 Identities = 180/236 (76%), Gaps = 0/236 (0%) Strand=Plus/Minus Query 68227 TTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTAT 68286 |||| |||||||| | || || | |||||||| || || |||||||| |||||||| | Sbjct 98124 TTTAGTTTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGT 98065 Query 68287 AATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGT 68346 | ||| || || | |||||||| | || || |||||||| |||| | ||||||| Sbjct 98064 AGTCGCTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGT 98005 Query 68347 CGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTG 68406 | || ||||||||||||||||||||||| || || || || |||||| ||||| || Sbjct 98004 CTGGGGGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTG 97945 Query 68407 ATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||| ||||| | ||||||||||| || || |||||||| || || || |||||| Sbjct 97944 GTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCATT 97889 Score = 136 bits (150), Expect = 7e-27 Identities = 172/234 (74%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||| ||| || || |||||||| |||||||| || ||| Sbjct 97662 TTCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 97603 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | |||||||| | || || || ||||| || | | |||||||| || | Sbjct 97602 TCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGG 97543 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 |||||||||||||||||||||| || || || || ||||| || || ||| | || Sbjct 97542 GAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATC-GCTAGGCTCA 97484 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 ||||| | |||||| || || || ||||| || || || || || ||||||||| Sbjct 97483 ACTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCATTATG 97430 >seq10493 Length=264610 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| |||||||| | |||| || || |||||||| || |||||||| || ||| Sbjct 49967 TTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 49908 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||| | || ||||| | ||||| |||||||| || | ||||| ||||| |||| Sbjct 49907 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 49848 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || || |||||||| ||||| || || || ||| || ||||| || ||| | Sbjct 49847 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 49788 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 49787 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49738 Score = 181 bits (200), Expect = 2e-40 Identities = 178/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| |||||||| | |||| || || |||||||| || |||||||| || ||| Sbjct 50195 TTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 50136 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||| | || ||||| | ||||| |||||||| || | ||||| ||||| |||| Sbjct 50135 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 50076 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || || |||||||| ||||| || || || ||| || ||||| || ||| | Sbjct 50075 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 50016 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 50015 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49966 Score = 174 bits (192), Expect = 3e-38 Identities = 178/230 (77%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| ||||| || | |||| || || |||||||| || |||||||| || || Sbjct 49511 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAC 49452 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||| | || ||||| | ||||| |||||||| || ||||||||||||||||| | Sbjct 49451 TCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCG 49392 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCT 68411 |||||||||| ||||| ||||| || ||||| || ||||| || || ||| | ||| Sbjct 49391 GAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATC-GCTCGGTTCG 49333 Query 68412 ACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || || || |||||||||||||| || || ||||| || || |||||||| Sbjct 49332 ACCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCAT 49283 Score = 172 bits (190), Expect = 1e-37 Identities = 176/230 (77%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| ||||| || | |||| || || |||||||| || |||||||| || || Sbjct 49739 TTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCAC 49680 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||| | || ||||| | ||||| |||||||| || | ||||| ||||| |||| Sbjct 49679 TCAGTGTGCGTCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 49620 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || || |||||||| ||||| || || || ||| || ||||| || ||| | Sbjct 49619 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 49560 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 49559 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 49510 Score = 167 bits (184), Expect = 4e-36 Identities = 175/230 (76%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| | || || | |||| || || |||||||| || |||||||| || ||| Sbjct 50651 TTCCTCCTCTCAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGC 50592 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 ||||| | || ||||| | ||||| |||||||| || | ||||| ||||| |||| Sbjct 50591 TCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTG 50532 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 | || || || |||||||| ||||| || || || ||| || ||||| || ||| | Sbjct 50531 GGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAA 50472 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATT 68462 ||||||| |||||||| ||||| ||||| ||||||||||| ||||||||| Sbjct 50471 CTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCATT 50422 >seq10777 Length=1546546 Score = 154 bits (170), Expect = 3e-32 Identities = 174/233 (75%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 68233 TTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGG 68292 ||||||| || || || | |||| ||| || || |||||||| |||||||| || ||| Sbjct 767694 TTCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGC 767635 Query 68293 AGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTG 68352 || || | |||||||| | ||| || |||||||| || | | |||||||| || | Sbjct 767634 TTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGG 767575 Query 68353 GAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTA 68412 |||||||||||||||||||||| || || || || |||||| ||||| | || | Sbjct 767574 GAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGA 767515 Query 68413 CTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATG 68465 |||| | |||||| ||||| || ||||| || || || || || ||||| ||| Sbjct 767514 CTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCATGATG 767462 >seq10646 Length=461484 Score = 104 bits (114), Expect = 4e-17 Identities = 91/111 (82%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 |||||||| || |||||||| |||||||| |||||||||||| ||| | || || || Sbjct 167380 CCTTCCTTATCCTGAATCTTAGCCTTGACATTCTCGATGGTGTC-GCTAGGCTCAACCTC 167322 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 | |||||||||||| ||||| ||||| |||||||| |||||||| |||| Sbjct 167321 AAGGGTGATGGTTTTACCCGTCAGGGTTTTGACGAAAATCTGCATGGTGCT 167271 >seq10338 Length=139870 Score = 104 bits (114), Expect = 4e-17 Identities = 91/111 (82%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 |||||||| || |||||||| |||||||| |||||||||||| ||| | || || || Sbjct 97526 CCTTCCTTATCCTGAATCTTAGCCTTGACATTCTCGATGGTGTC-GCTAGGCTCAACCTC 97468 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 | |||||||||||| ||||| ||||| |||||||| |||||||| |||| Sbjct 97467 AAGGGTGATGGTTTTACCCGTCAGGGTTTTGACGAAAATCTGCATGGTGCT 97417 >seq10391 Length=168036 Score = 98.7 bits (108), Expect = 2e-15 Identities = 90/111 (81%), Gaps = 2/111 (2%) Strand=Plus/Minus Query 68358 CCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCT-GATTCTACTTC 68416 |||||||| || |||||||| |||||||| |||||||||||| ||| | || || || Sbjct 55899 CCTTCCTTATCCTGAATCTTAGCCTTGACATTCTCGATGGTGTC-GCTAGGCTCAACCTC 55841 Query 68417 CAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCATTATGCT 68467 | |||||||||||| ||||| ||||| ||||| || |||||||| |||| Sbjct 55840 AAGGGTGATGGTTTTACCCGTCAGGGTTTTGACAAAAATCTGCATGGTGCT 55790 >seq10798 Length=2343873 Score = 93.3 bits (102), Expect = 8e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || | || ||||||||||| || ||||||||||||||||| || ||| Sbjct 1324525 CCACCACGCAGCCTCAGCACCAAGTGTAGGGTTGACTCTTTTTGGATGTTGTAGTCGCTA 1324466 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 || || | |||||||| | |||||| || || || || || | ||| ||||| || ||| Sbjct 1324465 AGGGTACGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCTGGAGGA 1324406 Query 68355 ATGCCT 68360 |||||| Sbjct 1324405 ATGCCT 1324400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 921497934894880