Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_009011.2 Length=131331 Score E Sequences producing significant alignments: (Bits) Value seq10485 122 7e-23 seq10777 114 1e-20 seq10493 114 1e-20 seq10798 113 4e-20 >seq10485 Length=261005 Score = 122 bits (134), Expect = 7e-23 Identities = 145/197 (74%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| ||||||| || || |||||| |||||||||||| Sbjct 97630 GTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCGAGTTGTTTACCA 97571 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || | |||||||||||| || ||||||||||| ||||| ||| || ||| Sbjct 97570 GCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTAGCTTTC 97511 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | ||| | || ||| | | || || || | ||| | || ||||| || || ||| Sbjct 97510 ACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGTCTTGCCAGTGAGTGTT 97451 Query 114366 TTTACAAAAATCTGCAT 114382 || ||||| || ||||| Sbjct 97450 TTCACAAAGATTTGCAT 97434 Score = 122 bits (134), Expect = 7e-23 Identities = 153/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || ||||| || |||||||| ||||| | || || |||||| Sbjct 98099 AACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCTTC 98040 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||||| || ||| |||||| |||||||||||| || ||||||||||| ||||| Sbjct 98039 GAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTG 97980 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||| || ||| | | || | |||||| | | ||| || || | || | ||||| Sbjct 97979 AATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTT 97920 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||||| || || ||||| || ||||| Sbjct 97919 CCCGGTCAGGGTCTTCACAAAGATTTGCAT 97890 Score = 113 bits (124), Expect = 4e-20 Identities = 151/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| || || | || || ||||| || |||||||| ||||| | || || |||||| Sbjct 97871 AACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCTTC 97812 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 || ||||| || ||| ||||||| || |||||||| || ||||||||||| ||||| Sbjct 97811 TAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTG 97752 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||| || ||| | | || | |||||| | | ||| || || | || | ||||| Sbjct 97751 AATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTT 97692 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||||||| || || ||||| || ||||| Sbjct 97691 CCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10777 Length=1546546 Score = 114 bits (126), Expect = 1e-20 Identities = 144/198 (73%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 114186 GTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTCAAGTTGTTTACCA 114245 || || ||||| || |||||||| ||||| | || || ||||||||| ||||| || Sbjct 767662 GTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCTTCAAGCTGTTTTCCG 767603 Query 114246 GCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGCAATCTTTTGTTTT 114305 ||| | || | |||||||||||| || ||||||||||| ||||| ||| || |||| Sbjct 767602 GCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTCGCTTTT 767543 Query 114306 AGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTTGCCGGTCAGAGTT 114365 | | || | ||||| | | ||||| || | ||| | ||||| || || || ||| Sbjct 767542 ACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTTTTACCAGTGAGTGTT 767483 Query 114366 TTTACAAAAATCTGCATG 114383 || ||||| || |||||| Sbjct 767482 TTCACAAAGATTTGCATG 767465 >seq10493 Length=264610 Score = 114 bits (126), Expect = 1e-20 Identities = 164/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| || Sbjct 49512 ATTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 49453 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||||| ||||| || || ||| |||| || | |||||||| || Sbjct 49452 CTCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGC 49393 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 ||||||||||||||||| ||| || || | | ||| | || ||| | | |||| Sbjct 49392 GGAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCG 49333 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCATG 114383 || || | || | ||||| ||||||||||| || ||||| ||||||||| Sbjct 49332 ACCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCATG 49282 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 114156 CCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTC 114215 || ||||| || | | ||| | ||| | || || || || || |||||||| |||||| Sbjct 50877 CCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTC 50818 Query 114216 ATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGA 114275 | || ||| ||||||||||| || || || |||| | | ||||||||| || || Sbjct 50817 AGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGTGGG 50758 Query 114276 ATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACG 114335 || || |||||||| ||||| ||| | | |||| ||||| | | ||| || Sbjct 50757 ATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACT 50698 Query 114336 TCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 |||| || | || || || || |||||||| || ||||||||||| Sbjct 50697 TCCAAAGTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCAT 50651 Score = 100 bits (110), Expect = 2e-16 Identities = 160/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| ||| Sbjct 50424 ATTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCG 50365 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| ||||||||||| || || ||| |||| | | || ||||| || Sbjct 50364 CTCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGT 50305 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||| ||| | | |||| ||||| | | ||| Sbjct 50304 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCA 50245 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || |||||||| || ||||||||||| Sbjct 50244 ACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTGCAT 50195 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| ||| Sbjct 49968 ATTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCG 49909 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| ||||||||||| || || ||| |||| | | || ||||| || Sbjct 49908 CTCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGT 49849 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||| ||| | | |||| ||||| | | ||| Sbjct 49848 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCA 49789 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || ||||| || || ||||||||||| Sbjct 49788 ACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 49739 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| ||| Sbjct 50196 ATTCCTCCACGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCG 50137 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || ||| ||||||||||| || || ||| |||| | | || ||||| || Sbjct 50136 CTCAGTGTGCGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGT 50077 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||| ||| | | |||| ||||| | | ||| Sbjct 50076 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCA 50017 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || ||||| || || ||||||||||| Sbjct 50016 ACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 49967 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 114173 AACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCTCATAGTACGAGAATCTTC 114232 ||| | ||| | || || || || || |||||||| ||||||| || ||| ||||| Sbjct 50632 AACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCTTC 50573 Query 114233 AAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGGAATGCCTTCTTTGTCGGC 114292 |||||| || || ||| |||| | | || ||||| || || || || |||||||| Sbjct 50572 AAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCTTG 50513 Query 114293 AATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCGACGTCCACGGTCACCGTTTT 114352 ||||| ||| | | |||| ||||| | | ||| || |||| || | || || Sbjct 50512 GATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTCTT 50453 Query 114353 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || || ||||| || || ||||||||||| Sbjct 50452 TCCAGTGAGAGTCTTGACGAAAATCTGCAT 50423 Score = 86.0 bits (94), Expect = 5e-12 Identities = 157/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 114153 ATACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCG 114212 || || ||||| || | | ||| | ||| | || || || || || |||||||| || Sbjct 49740 ATTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 49681 Query 114213 CTCATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGA 114272 |||| || || ||||||||||| || || ||| |||| | | || ||||| || Sbjct 49680 CTCAGTGTGCGTCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGT 49621 Query 114273 GGAATGCCTTCTTTGTCGGCAATCTTTTGTTTTAGCTGTTCAACGGTGTCGGTGGATTCG 114332 || || || |||||||| ||||| ||| | | |||| ||||| | | ||| Sbjct 49620 GGGATACCCTCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCA 49561 Query 114333 ACGTCCACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCAT 114382 || |||| || | || || || || ||||| || || ||||||||||| Sbjct 49560 ACTTCCAAAGTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTGCAT 49511 >seq10798 Length=2343873 Score = 113 bits (124), Expect = 4e-20 Identities = 101/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Minus Query 114155 ACCGCCACGTAGTCTCAAAACTAAATGTATCGTAGATTCTTTTTGAATGTTGTAATCGCT 114214 ||| ||||| || |||| || || |||| || || |||||||| |||||||| ||||| Sbjct 1324526 ACCACCACGCAGCCTCAGCACCAAGTGTAGGGTTGACTCTTTTTGGATGTTGTAGTCGCT 1324467 Query 114215 CATAGTACGAGAATCTTCAAGTTGTTTACCAGCGTAGATGAGACGCTGTTGGTCCGGAGG 114274 | |||||| ||||||||| || |||||||| |||| ||||| || ||||| ||||| Sbjct 1324466 AAGGGTACGACCATCTTCAAGCTGCTTACCAGCAAAGATAAGACGTTGCTGGTCTGGAGG 1324407 Query 114275 AATGCCT 114281 ||||||| Sbjct 1324406 AATGCCT 1324400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 420079079328048