Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_011423.1 Length=111724 Score E Sequences producing significant alignments: (Bits) Value seq10485 152 4e-32 seq10777 145 5e-30 >seq10485 Length=261005 Score = 152 bits (168), Expect = 4e-32 Identities = 161/211 (76%), Gaps = 1/211 (0%) Strand=Plus/Minus Query 14974 TGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTCTTCTAATTGT 15033 |||||||| || ||||| || |||||||| ||||| || ||| | ||||| | |||| Sbjct 97636 TGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCTTCGAGTTGT 97577 Query 15034 TTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTCACAAATTTTG 15093 || |||||| | || |||||||||||||| ||||| ||||||||||| |||||| Sbjct 97576 TTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTA 97517 Query 15094 CTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGTTTTACCTGTC 15153 ||| ||| |||| || ||||||||| || || |||| ||| || || || || || Sbjct 97516 GCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGTCTTGCCAGTG 97457 Query 15154 AGAGTTTTTACAAAAATTTGCATATTTGAAA 15184 || ||||| ||||| |||||||| | ||||| Sbjct 97456 AGTGTTTTCACAAAGATTTGCAT-TATGAAA 97427 Score = 141 bits (156), Expect = 7e-29 Identities = 159/213 (75%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 || ||| || ||||| || || ||||| || |||||||| ||||| || ||| | || Sbjct 98102 TAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATC 98043 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 ||| | |||||| || ||| | || |||||||||||||| ||||| ||||||||||| Sbjct 98042 TTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 97983 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 |||||| ||| ||| | || || || ||||| ||| || |||| || ||||| Sbjct 97982 TTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGT 97923 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || ||||| || || ||||| |||||||| Sbjct 97922 TTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97890 Score = 127 bits (140), Expect = 1e-24 Identities = 156/213 (73%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 14964 TAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTGAGAATTCTCGCGTC 15023 || ||| || ||||| || || ||||| || |||||||| ||||| || ||| | || Sbjct 97874 TAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATC 97815 Query 15024 TTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGAATTCCTTCCTTGTC 15083 ||||| ||||| || ||| | || | || |||||||| ||||| ||||||||||| Sbjct 97814 TTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTC 97755 Query 15084 ACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACGTCTAAGGTAATGGT 15143 |||||| ||| ||| | || || || ||||| ||| || |||| || ||||| Sbjct 97754 TTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGT 97695 Query 15144 TTTACCTGTCAGAGTTTTTACAAAAATTTGCAT 15176 ||| || ||||| || || ||||| |||||||| Sbjct 97694 TTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10777 Length=1546546 Score = 145 bits (160), Expect = 5e-30 Identities = 177/240 (74%), Gaps = 1/240 (0%) Strand=Plus/Minus Query 14950 CCACCTCGCAATCTTAAAACTAAATGAAGGGTAGAATCTTTTTGTATGTTGTAATCGCTG 15009 || ||||| | | || ||| | |||||||| || ||||| || |||||||| ||||| Sbjct 767692 CCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTT 767633 Query 15010 AGAATTCTCGCGTCTTCTAATTGTTTGCCAGCGTATATCAAACGCTGTTGGTCGTTTGGA 15069 || ||| | ||||| | ||||| || ||| | || |||||||||||||| ||| Sbjct 767632 AGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGGA 767573 Query 15070 ATTCCTTCCTTGTCACAAATTTTGCTTTTTACAATTTCTATAGTATCGCTATTTTCTACG 15129 || ||||||||||| |||||| ||||||| | || || || || ||| || || Sbjct 767572 ATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGACT 767513 Query 15130 TCTAAGGTAATGGTTTTACCTGTCAGAGTTTTTACAAAAATTTGCATATTTGAAATAAAT 15189 |||| ||| || |||||||| || || ||||| ||||| |||||||| ||||| |||| Sbjct 767512 TCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT-GATGAAAAAAAT 767454 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 357344940855140