Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_011616.1 Length=148634 Score E Sequences producing significant alignments: (Bits) Value seq10777 105 6e-18 seq10485 96.9 3e-15 seq10493 91.5 1e-13 >seq10777 Length=1546546 Score = 105 bits (116), Expect = 6e-18 Identities = 142/198 (72%), Gaps = 0/198 (0%) Strand=Plus/Minus Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976 || |||||||| || || ||||| |||| | || || ||| || ||||||||||| Sbjct 767662 GTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCTTCAAGCTGTTTTCCG 767603 Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036 ||| | || || ||||| || || || || ||||| |||||||| |||||| || Sbjct 767602 GCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTCGCTTTT 767543 Query 127037 AGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGTT 127096 | | |||| ||||| || ||||||||| | ||| | ||||| || || || ||| Sbjct 767542 ACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGTTTTACCAGTGAGTGTT 767483 Query 127097 TTTACAAAAATCTGCATG 127114 || ||||| || |||||| Sbjct 767482 TTCACAAAGATTTGCATG 767465 >seq10485 Length=261005 Score = 96.9 bits (106), Expect = 3e-15 Identities = 149/210 (71%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 ||||| || | || |||||||| || || ||||| |||| | || || ||| ||| Sbjct 97870 ACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCGCTAAGGGTTCGGCCATCTTCT 97811 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 ||||||||||| ||| |||| | ||| || || || || || ||||| ||||||| | || Sbjct 97810 AGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGT-CTTG 97752 Query 127025 ATTTTCTGC-TTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTT 127083 | ||| || || | | |||| ||||| | || ||||| | || | ||||| Sbjct 97751 AATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGGTTTT 97692 Query 127084 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113 |||||||| || || ||||| || ||||| Sbjct 97691 CCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10493 Length=264610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 146/210 (70%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 126905 ACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCT 126964 |||| ||| | || ||||| || || || ||||| || | || ||||| || || Sbjct 49491 ACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTGCGTCCGTCTTCG 49432 Query 126965 AGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTG 127024 || || || || ||| |||| | || || || ||||| || ||||| || |||||| Sbjct 49431 AGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCTTCTTTGTCCTGA 49372 Query 127025 ATTTTCTGCTTGAGTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTG 127084 |||||| ||| | | ||||| || || | ||||| || | || | ||||| Sbjct 49371 ATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAAGTGATGGTTTTT 49312 Query 127085 CCGGTCAGAGTTTTTACAAAAATCTGCATG 127114 ||||||||||| || ||||| ||||||||| Sbjct 49311 CCGGTCAGAGTCTTCACAAAGATCTGCATG 49282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 475436583616960