Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_012639.1 Length=141291 Score E Sequences producing significant alignments: (Bits) Value seq10777 118 1e-21 seq10485 113 4e-20 seq10493 91.5 1e-13 >seq10777 Length=1546546 Score = 118 bits (130), Expect = 1e-21 Identities = 164/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| ||||| | | || || || || || || || || ||||| || || ||| Sbjct 767695 ATTCCTCCTCGGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCG 767636 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | |||| ||| || | |||||||| ||| | || || || || ||||| || Sbjct 767635 CTTAGGGTTCGGCCATCTTCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGG 767576 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || ||||||||||| ||| | || | ||||| || |||| Sbjct 767575 GGAATGCCTTCCTTGTCTTGAATTTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCG 767516 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | ||||| || || || ||||| ||||| |||||||| Sbjct 767515 ACTTCTAGGGTGATAGTTTTACCAGTGAGTGTTTTCACAAAGATTTGCAT 767466 >seq10485 Length=261005 Score = 113 bits (124), Expect = 4e-20 Identities = 163/230 (71%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||| | | || || || || || || || || ||||| || || ||| Sbjct 97663 ATTCCTCCTCTGAGACGTAGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCG 97604 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | |||| ||| || | |||||| || ||| | || || || || ||||| || Sbjct 97603 CTCAGGGTTCGGCCATCTTCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGG 97544 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || ||||||||||| ||| | ||| | || ||| || ||| Sbjct 97543 GGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCA 97484 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| || || | || ||||| || || ||||| ||||| |||||||| Sbjct 97483 ACTTCTAGGGTGATAGTCTTGCCAGTGAGTGTTTTCACAAAGATTTGCAT 97434 Score = 111 bits (122), Expect = 1e-19 Identities = 169/240 (70%), Gaps = 2/240 (1%) Strand=Plus/Minus Query 45103 TTTATTTTA--TTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGAT 45160 |||| |||| ||||||| | ||| | | || | || || || || || || ||||| Sbjct 98129 TTTAGTTTAGTTTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGAT 98070 Query 45161 ATTATAATCGCTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTG 45220 || || ||||| | |||| ||| || | ||||||||| ||| | || || || || Sbjct 98069 GTTGTAGTCGCTAAGGGTTCGGCCATCTTCGAGTTGTTTTCCGGCGAAGATGAAACGCTG 98010 Query 45221 CTGGTCCGGCGGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTC 45280 ||||| || ||||||||||| || ||||||||||| ||| | || | ||||| Sbjct 98009 TTGGTCTGGGGGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTC 97950 Query 45281 GGAAGACTCGACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 | | || ||||| ||||| | ||||| ||||| || || || ||||| |||||||| Sbjct 97949 GCTTGGTTCAACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97890 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| | ||| | | || | || || || || || || ||||| || || ||| Sbjct 97891 ATTCCTCCTCTGAGACGTAGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTCG 97832 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | |||| ||| || | |||||||| ||| | || | |||||| ||||| || Sbjct 97831 CTAAGGGTTCGGCCATCTTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGG 97772 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 ||||||||||| || ||||||||||| ||| | || | |||||| | || Sbjct 97771 GGAATGCCTTCCTTGTCTTGAATTTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCA 97712 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 ||||| ||||| | ||||| ||||| || || || ||||| |||||||| Sbjct 97711 ACTTCTAGAGTGATGGTTTTCCCGGTCAGGGTCTTCACAAAGATTTGCAT 97662 >seq10493 Length=264610 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 45111 ATTCCTCCGCGGAGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCG 45170 |||||||| || || | | || ||||| || || || ||||| ||||| || || || Sbjct 49512 ATTCCTCCACGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCA 49453 Query 45171 CTGACGGTTTTAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGC 45230 || | || || || | ||| || || ||| | || | || ||| ||||| ||| Sbjct 49452 CTCAGTGTGCGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGC 49393 Query 45231 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCG 45290 |||||||||||||| || |||||||| || | ||| | || ||| | ||| Sbjct 49392 GGAATGCCTTCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCG 49333 Query 45291 ACTTCGAGAGTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340 || || | ||| | ||||| ||||| ||||| || ||||| || ||||| Sbjct 49332 ACCTCTAAAGTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTGCAT 49283 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 451942156967840