Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_012743.2 Length=62715 Score E Sequences producing significant alignments: (Bits) Value seq2361 104 9e-18 >seq2361 Length=2839 Score = 104 bits (114), Expect = 9e-18 Identities = 209/306 (68%), Gaps = 13/306 (4%) Strand=Plus/Minus Query 9120 GTCAACAAAGTCATCCTCGTCGGCAATCTCGGCGCCGACCCGGAAACCCGCTACCTCCCG 9179 || ||||||||||| || ||||||| ||| ||||||||||| |||||||| || Sbjct 2289 GTTAACAAAGTCATTCTGGTCGGCACCTGCGGACAGGACCCGGAAACTCGCTACCTGCCA 2230 Query 9180 AGCGGCGACGCAATCTCCAATATCCGTCTCGCGACGACCGATCGCTACAAGGACAAGGCG 9239 |||||| |||| || |||| | | || ||||| | ||| | | | |||||| | Sbjct 2229 AGCGGCAACGCGGTCACCAACCTGAGCCTGGCGACCAGCGAGCAGTGGACCGACAAGCAG 2170 Query 9240 AGCGGC---GAGTTCAAGGAAGTGACCGAGTGGCACCGCGTCGCTTTCTTCGGCCGCCTC 9296 | ||| || || || || |||||||||||||| || | | |||||| | Sbjct 2169 ACTGGCCAGAAGGTCGAGAAA---ACCGAGTGGCACCGTGTGTCGCTGTTCGGCAAGGTT 2113 Query 9297 GCCGAGATCGTCGACGAGCACCTTCGCAAGGG--CGCATCGGTCTACATCGAGGGGCGCA 9354 |||||||| | | |||| |||| ||||| || |||| ||| || |||||||| Sbjct 2112 GCCGAGATTGCTGGCGAGTACCTGCGCAAAGGTTCGCA--GGTATATATCGAGGGCAAGC 2055 Query 9355 TCAAGACGCGGAAGTGGCAGGATCAATCCGGCCAGGATCGCTACACGACCGAGATCGTCG 9414 | |||| || |||| ||| || |||| | |||||||| ||||| ||| ||| Sbjct 2054 TGCAGACCCGCGAGTG---GGAAAAAGACGGCGTTAAGCGCTACACCACCGAAATCATCG 1998 Query 9415 CCGACA 9420 ||||| Sbjct 1997 TCGACA 1992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 200536791091344