Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_013055.1 Length=39896 Score E Sequences producing significant alignments: (Bits) Value seq9826 156 1e-33 >seq9826 Length=41569 Score = 156 bits (172), Expect = 1e-33 Identities = 199/274 (73%), Gaps = 0/274 (0%) Strand=Plus/Plus Query 8849 CCGAAATATCGCGCGCACTCAAACAAATTGCGAAGGAACTCGACGTTCCGATCATCGCGC 8908 ||||||| || ||| | |||||| | || || ||| || || ||| | || || | Sbjct 193 CCGAAATCTCCCGCTCGCTCAAAGCCCTGGCCAAAGAATTCAACTGCCCGGTGATTGCCC 252 Query 8909 TGTCGCAGCTTAATCGAGGGCTCGAGAATCGCCCAAACAAGCGGCCCGTCATGTCCGATC 8968 ||||||||||||| || || || ||| | ||||| ||||| || || ||| ||||| Sbjct 253 TGTCGCAGCTTAACCGTGGCCTGGAGCAGCGCCCTAACAAACGCCCGATCAACTCCGACT 312 Query 8969 TGCGCGAGTCGGGTGCGATCGAGCAGGATGCCGACGTGATCCTCTTTATCTACCGCGATG 9028 ||||||| || || || ||||||||||| |||||| | ||| | || | |||||||| | Sbjct 313 TGCGCGAATCCGGGGCAATCGAGCAGGACGCCGACATCATCATGTTCGTTTACCGCGACG 372 Query 9029 AGGTCTATAACCCCGACAGCGCAGATCGCGGTACGGCCGAAATCATCATTGCGAAGCAGC 9088 |||| ||| ||||||| | || | || |||||||||||| || | ||||||| Sbjct 373 AGGTGTATCACCCCGAGACCGAGTACAAGGGCGTGGCCGAAATCATTATCGGCAAGCAGC 432 Query 9089 GAAACGGGCCGATTGGCACCGTACGGCTCGCATT 9122 | ||||| ||| | || || | |||||| || || Sbjct 433 GTAACGGCCCGCTGGGTACGGCACGGCTGGCGTT 466 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127529236218384