Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq10493 123 6e-23 seq10485 123 6e-23 seq10777 114 3e-20 >seq10493 Length=264610 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| |||||||||| || || Sbjct 49503 CGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTG 49444 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||| || ||||| ||||||||||| || | || ||||| || ||| ||| Sbjct 49443 CGTCCGTCTTCGAGTTGCTTGCCGGCGAAGATAAGTCTTTGTTGGTCGGGCGGAATGCCT 49384 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| |||||||| || |||||| ||||| || || | | ||| || || || Sbjct 49383 TCTTTGTCCTGAATTTTCGCCTTCACATTTTCGATCGTATCGCTCGGTTCGACCTCTAAA 49324 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| || || || || ||||| |||||||| || || Sbjct 49323 GTGATGGTTTTTCCGGTCAGAGTCTTCACAAAGATCTG 49286 Score = 114 bits (126), Expect = 3e-20 Identities = 156/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| |||||||||| || || Sbjct 49731 CGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCACTCAGTGTG 49672 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | ||| ||||| || ||||| ||||||||||| | | |||||||| || || || Sbjct 49671 CGTCCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCC 49612 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||||| || | ||||| ||| ||| || ||||| Sbjct 49611 TCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAA 49552 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || ||||| || Sbjct 49551 GTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTG 49514 Score = 109 bits (120), Expect = 1e-18 Identities = 155/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| ||||||||| || || Sbjct 50415 CGAAGACGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTG 50356 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||||||||| | | |||||||| || || || Sbjct 50355 CGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCC 50296 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||||| || | ||||| ||| ||| || ||||| Sbjct 50295 TCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAA 50236 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || ||||| || Sbjct 50235 GTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTG 50198 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| ||||||||| || || Sbjct 49959 CGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTG 49900 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||||||||| | | |||||||| || || || Sbjct 49899 CGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCC 49840 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||||| || | ||||| ||| ||| || ||||| Sbjct 49839 TCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAA 49780 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || ||||| || Sbjct 49779 GTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTG 49742 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| ||||||||| || || Sbjct 50187 CGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTG 50128 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||||||||| | | |||||||| || || || Sbjct 50127 CGACCGTCTTCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCC 50068 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||||| || | ||||| ||| ||| || ||||| Sbjct 50067 TCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAA 50008 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || |||||||| || || ||||| || Sbjct 50007 GTGATGGTCTTTCCAGTGAGAGTCTTGACGAAAATCTG 49970 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | || || || || || || |||||||| |||| ||||||||| || || Sbjct 50871 CGAAGGCGTAGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTG 50812 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || ||||| || ||||| ||||| ||||| | | ||| ||||| || || || Sbjct 50811 CGACCGTCTTCAAGTTGCTTGCCGGCAAAGATCAACCTCTGTTGGTCTGGTGGGATACCC 50752 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 ||| || || ||||| ||||| || | ||||| ||| ||| || ||||| Sbjct 50751 TCTTTGTCTTGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAA 50692 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| || ||||||||||| || ||||| || Sbjct 50691 GTGATGGTCTTTCCAGTGAGAGTTTTGACGAAAATCTG 50654 Score = 102 bits (112), Expect = 2e-16 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || || || || || |||||||| |||| ||||||||| || || | || ||| Sbjct 50634 AGAACCAGATGAAGTGTGGACTCCTTCTGGATGTTGTAGTCGCTCAGTGTGCGACCGTCT 50575 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || ||||| ||||||||||| | | |||||||| || || || ||| || Sbjct 50574 TCAAGTTGCTTGCCGGCGAAGATCAACCTTTGCTGGTCTGGTGGGATACCCTCTTTGTCT 50515 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| || | ||||| ||| ||| || ||||| ||||| ||| Sbjct 50514 TGGATCTTGGCTTTCACATTCTCAATTGTGTCACTTGGTTCAACTTCCAAAGTGATGGTC 50455 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || || ||||| || Sbjct 50454 TTTCCAGTGAGAGTCTTGACGAAAATCTG 50426 >seq10485 Length=261005 Score = 123 bits (136), Expect = 6e-23 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAG-TCCTTCCATC 199476 || || | ||| ||||||||||| || |||| ||||||||| || || | | | ||||| Sbjct 97873 AGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTC-GCTAAGGGTTCGGCCATC 97815 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| ||||| ||||||||||||||||| || || ||||| || ||| ||||| || Sbjct 97814 TTCTAGCTGTTTTCCGGCGAAGATGAGTCGTTGTTGGTCTGGGGGAATGCCTTCCTTGTC 97755 Query 199537 CTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 ||||| ||| || ||||| |||| ||||| ||| ||| || || | ||||| | Sbjct 97754 TTGAAT-TTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGG 97696 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || |||||||| ||||| Sbjct 97695 TTTTCCCGGTCAGGGTCTTCACAAAGATTTG 97665 Score = 123 bits (136), Expect = 6e-23 Identities = 157/211 (74%), Gaps = 4/211 (2%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAG-TCCTTCCATC 199476 || || | ||| ||||||||||| || |||| ||||||||| || || | | | ||||| Sbjct 98101 AGAACCAAGTGAAGAGTCGACTCTTTCTGGATGTTGTAGTC-GCTAAGGGTTCGGCCATC 98043 Query 199477 TTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTC 199536 ||| || || |||||||||||||||| |||||| ||||| || ||| ||||| || Sbjct 98042 TTCGAGTTGTTTTCCGGCGAAGATGAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTC 97983 Query 199537 CTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCG 199595 ||||| ||| || ||||| |||| ||||| ||| ||| || || | ||||| | Sbjct 97982 TTGAAT-TTTAGCTTTCACATTCTCGATTGTGTCGCTTGGTTCAACTTCTAGAGTGATGG 97924 Query 199596 TCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 | || || || || || |||||||| ||||| Sbjct 97923 TTTTCCCGGTCAGGGTCTTCACAAAGATTTG 97893 Score = 111 bits (122), Expect = 4e-19 Identities = 152/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || |||||||| || |||| ||||||||| || || | |||||| Sbjct 97645 AGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTCAGGGTTCGGCCATCT 97586 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || || || || || ||||| || | |||||| ||||| || ||| ||||| || Sbjct 97585 TCGAGTTGTTTACCAGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 97526 Query 199538 TGAATCTTTTGCTT-CACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| |||| ||| ||||| || || | | || || || | ||||| || Sbjct 97525 TGAAT-TTTAGCTTTCACATTTTCGATCGTATCGCTAGGCTCAACTTCTAGGGTGATAGT 97467 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||| || ||||| ||||||||||| ||||| Sbjct 97466 CTTGCCAGTGAGTGTTTTCACAAAGATTTG 97437 >seq10777 Length=1546546 Score = 114 bits (126), Expect = 3e-20 Identities = 153/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || |||||||| || |||| ||||||||| | || | |||||| Sbjct 767677 AGAACCAGGTGAAGGGTCGACTCTTTCTGGATGTTGTAGTCGCTTAGGGTTCGGCCATCT 767618 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || ||||| ||||||||||| || | |||||| ||||| || ||| ||||| || Sbjct 767617 TCAAGCTGTTTTCCGGCGAAAATTAAACGCTGTTGGTCTGGGGGAATGCCTTCCTTGTCT 767558 Query 199538 TGAATCTTTTGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGT 199596 ||||| ||| |||| || |||| ||||| | | || || || | ||||| || Sbjct 767557 TGAAT-TTTCGCTTTTACATTCTCGATCGTGTCACTAGGCTCGACTTCTAGGGTGATAGT 767499 Query 199597 CTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| ||||| ||||||||||| ||||| Sbjct 767498 TTTACCAGTGAGTGTTTTCACAAAGATTTG 767469 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178758406303868