Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Nematostella_20vectensis_20[refseq_20GCF_5F000209225.1_202007-08-22] 10,804 sequences; 356,613,585 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq8589 206 1e-47 seq10485 129 2e-24 seq10777 118 4e-21 seq10532 105 3e-17 seq10661 95.1 5e-14 seq10768 93.3 2e-13 seq10493 91.5 6e-13 >seq8589 Length=14632 Score = 206 bits (228), Expect = 1e-47 Identities = 436/633 (69%), Gaps = 27/633 (4%) Strand=Plus/Minus Query 496953 TTTCCTATTAAATATCATAAAATCTGGGATTTATATaaaaaaaTGGAAGCAGCTTTTTGG 497012 ||||| ||||| ||||| | || ||||| | || ||||||||||| ||| ||||||| Sbjct 6366 TTTCCAATTAAGCATCATGATATTTGGGAATGGTACAAAAAAATGGAGGCAAGTTTTTGG 6307 Query 497013 ACAGCTGAAGAAATAGATTGGTCTAAAGATAA-ACATGATTTTAAAA---AATTAAATCA 497068 || |||||||||||||||| | | |||||| ||| || | || | |||||||| | Sbjct 6306 ACTGCTGAAGAAATAGATTTGCATCAAGATATCACA-GACTGGAACACGAAATTAAATGA 6248 Query 497069 AGATGAACAACGATTTATTAAATATGTATTAGCAtttttttCGGCAAGTGATACAATTGT 497128 ||||||| || |||||||| || | ||||| |||||| | ||| ||| ||||| Sbjct 6247 AGATGAAAAATATTTTATTAAGCATATTTTAGCTTTTTTTGCTGCATCTGACGGGATTGT 6188 Query 497129 AAATATTAATTTAGGAGAAAGATTATCTCATGAAGTTCAACCACTTGAAGCCAAAATTGC 497188 ||| ||||||| ||||| || | ||||||| ||| ||||| ||| || Sbjct 6187 GAATGAAAATTTAGCAGAAAATTTTGTTAATGAAGTGCAATATGCCGAAGCTAAATTTTT 6128 Query 497189 TTATACTTTTCAAATGATGATGGAAGGGATCCATAGTGAAGTATATGCACTTCAAATAGA 497248 ||| |||||||| |||||||| || ||||| ||| ||| | ||| || || Sbjct 6127 CTATGGATTTCAAATTATGATGGAGAATATTCATAGCGAAACCTATTCTCTTTTGATTGA 6068 Query 497249 TA---ATATAATAGAAGATGTTCAAGAGAGAAAAGATATT-TTAAATTCAATAGAAACTG 497304 || || | | ||| || || ||||| || | | ||| || || | || ||| || Sbjct 6067 TACTTATGTGAAAGATGAGGT---AGAGA-AAGATAAATTATTCCATGCTATTGAAG-TG 6013 Query 497305 TACCCTGTATTAAAGCAAAAA-CTGATTGGATGTTAAAATGGGTTAAATCTGAAGAAAGT 497363 | || | | |||| |||| | || ||| ||||||||| || | ||||| | Sbjct 6012 TTTCCAGCAATAAAAAGAAAAGCAGAATGGGCATTAAAATGGATTGAGTCTGATTC---T 5956 Query 497364 TTTGCAACAAGAATGGTGGCACAAGTAATTTCTGAAGGATTAttttttagtggaagtttt 497423 ||||| |||| | | ||| | | | |||||| |||| || ||| ||| Sbjct 5955 TTTGCTGAAAGACTTATCGCATTTGCAGCTGTGGAAGGAATATTCTTCTCAGGAGCGTTT 5896 Query 497424 tgtgctattttttGGTTaaaaaataaaaaTATAATGCCTGGTTTAATCTCATCAAATGAA 497483 ||| |||||||||||||||| || | | ||||||||||||||| | || || || Sbjct 5895 TGTTCTATTTTTTGGTTAAAGAAAAGAGGGTTAATGCCTGGTTTAACATTTTCTAACGAG 5836 Query 497484 TTAATTGCACGGGATGAAGGAATGCATTGTGATTAT--AGT--ATTATGTTATATCA-CA 497538 |||||| | || ||||||||| |||||||||||| | ||| || | || |||| || Sbjct 5835 TTAATTTCTCGTGATGAAGGAGTGCATTGTGATTTTGCAGTGCATATTCATA-ATCATCA 5777 Query 497539 TGCTTCA-AAATAAACTGTCACAAGAAAAAATT 497570 | || | ||||||| || || |||||| |||| Sbjct 5776 T--TTAATAAATAAAGTGCCAAAAGAAAGAATT 5746 >seq10485 Length=261005 Score = 129 bits (142), Expect = 2e-24 Identities = 170/236 (72%), Gaps = 0/236 (0%) Strand=Plus/Plus Query 391047 ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCA 391106 |||||| | || || || |||||||| ||||| || ||||| || || || ||||| | Sbjct 97431 ATAATGCAAATCTTTGTGAAAACACTCACTGGCAAGACTATCACCCTAGAAGTTGAGCCT 97490 Query 391107 TCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGAT 391166 |||| || ||| | | ||| ||||||||||| |||||||| ||||| || || Sbjct 97491 AGCGATACGATCGAAAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGAC 97550 Query 391167 CAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTAT 391226 ||||| |||||||||||| | || |||||||| |||||||| |||| || || || Sbjct 97551 CAACAGCGTTTAATTTTCGCTGGTAAACAACTCGAAGATGGCCGAACCCTGAGCGACTAC 97610 Query 391227 AATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 || || | || || | || |||||| | || || | || |||||| ||| || Sbjct 97611 AACATCCAGAAAGAGTCGACCCTTCACCTGGTTCTACGTCTCAGAGGAGGAATGCA 97666 Score = 114 bits (126), Expect = 5e-20 Identities = 163/227 (72%), Gaps = 2/227 (1%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || ||||| || ||||| || ||||| || |||||| || Sbjct 97889 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97948 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | ||| ||||||||||| |||||||| ||||| || || || Sbjct 97949 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 98008 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA-CTTTGGCGGATTATA 391227 ||| ||||| || ||| | || |||||||| |||||||| ||| | || || || || | Sbjct 98009 ACAGCGTTTCATCTTCGCCGGAAAACAACTCGAAGATGGCCGAACCCTTAGC-GACTACA 98067 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGA 391274 | || | || || | || |||||||| || || | || |||||| Sbjct 98068 ACATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGTCTCAGAGGA 98114 Score = 105 bits (116), Expect = 3e-17 Identities = 166/235 (71%), Gaps = 2/235 (1%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | || || || || || ||||| || ||||| || ||||| || |||||| || Sbjct 97661 AATGCAAATCTTTGTGAAGACCCTGACCGGGAAAACCATCACTCTAGAAGTTGAACCAAG 97720 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 || | || || | | ||| ||||||||||| |||||||| ||||| || || || Sbjct 97721 CGACACAATCGAGAATGTGAAAGCTAAAATTCAAGACAAGGAAGGCATTCCCCCAGACCA 97780 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAA-CTTTGGCGGATTATA 391227 |||||| | || ||| | || ||||| || |||||||| ||| | || || || || | Sbjct 97781 ACAACGACTCATCTTCGCCGGAAAACAGCTAGAAGATGGCCGAACCCTTAGC-GACTACA 97839 Query 391228 ATATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACA 391282 | || | || || | || |||||||| || || | || |||||| ||| || Sbjct 97840 ACATCCAGAAAGAGTCGACTCTTCACTTGGTTCTACGTCTCAGAGGAGGAATGCA 97894 >seq10777 Length=1546546 Score = 118 bits (130), Expect = 4e-21 Identities = 133/177 (75%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 391038 TATTATATT-ATAATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGA 391096 |||| | || || ||| | || || || |||||||| |||||||||||||| || || || Sbjct 767453 TATTTTTTTCATCATGCAAATCTTTGTGAAAACACTCACTGGTAAAACTATCACCCTAGA 767512 Query 391097 TGTTGAATCATCTGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAAT 391156 || || | ||| | || || | | ||| ||||||||||| |||||||| || Sbjct 767513 AGTCGAGCCTAGTGACACGATCGAGAATGTAAAAGCGAAAATTCAAGACAAGGAAGGCAT 767572 Query 391157 TCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAAC 391213 ||| || || ||||| |||||||||||| | || ||||| ||||||||||| |||| Sbjct 767573 TCCCCCAGACCAACAGCGTTTAATTTTCGCCGGAAAACAGCTTGAAGATGGCCGAAC 767629 >seq10532 Length=317665 Score = 105 bits (116), Expect = 3e-17 Identities = 208/305 (68%), Gaps = 6/305 (2%) Strand=Plus/Plus Query 451283 GAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCT 451342 ||||| || ||| |||| |||| ||| || |||| || | ||||| ||||| Sbjct 234454 GAAACTGCTGAAGCATATCTTGGCAAGAAAGTCACCCATGCCGTTGTCACTGTCCCCGCC 234513 Query 451343 TATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAAT 451402 || |||||||||||||| || ||||| || || || ||||| ||||| ||| | | | Sbjct 234514 TACTTCAATGATGCACAGCGTCAAGCCACCAAGGACGCAGGTGCCATTGCCGGTCTTACT 234573 Query 451403 GTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCA 451462 || | || || || ||||||||||| || |||||| | || ||||| | ||| || Sbjct 234574 GTCATGCGTATCATCAATGAACCTACTGCTGCTGCTATCGCCTATGG-CATGGACAA--G 234630 Query 451463 AAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACT 451522 || || | ||| || || || | || |||||| | ||||| || || |||| Sbjct 234631 AAGGA---GGGAGAGAAGAACATCCTTGTCTTTGATCTCGGTGGTGGTACCTTTGATGTC 234687 Query 451523 TCTGTACTTTCAATTGAAGATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCAT 451582 || | | | ||||| |||| || ||||| || || || || || ||||||||| Sbjct 234688 TCCCTCTTAACGATTGACAATGGTGTCTTTGAGGTTGTTGCCACTAACGGAGATACTCAT 234747 Query 451583 CTAGG 451587 || || Sbjct 234748 CTTGG 234752 >seq10661 Length=563269 Score = 95.1 bits (104), Expect = 5e-14 Identities = 79/97 (81%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 450918 TTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAATGTAG 450977 ||||||| |||||||| || |||| ||| ||||||||||||| |||| | ||||| || | Sbjct 49978 TTGGAATCGATCTTGGTACTACCTATTCCTGTGTAGGTGTTTTCCAACACGGAAAGGTCG 49919 Query 450978 AAATTATAGCAAATGACCAAGGATCACGAACTACTCC 451014 ||||||| || || || |||||| || |||||||| Sbjct 49918 AAATTATTGCGAACGATCAAGGAAATCGCACTACTCC 49882 Score = 87.8 bits (96), Expect = 7e-12 Identities = 98/131 (75%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 ||||| || |||||| | || |||||||| ||||| |||||| ||| | || | | Sbjct 49298 ATTTCGTCCATGGTTTTGACCAAAATGAAGGAAACGGCAGAAGCTTATCTAGGGGCAAAA 49239 Query 451313 GTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACT 451372 || || ||||| ||| | || ||||| || || ||||| ||| |||| || || || || Sbjct 49238 GTAACCGATGCCGTAGTCACAGTTCCGGCCTACTTCAACGATTCACAGCGTCAGGCTACC 49179 Query 451373 AAAGATGCAGG 451383 ||||||||||| Sbjct 49178 AAAGATGCAGG 49168 >seq10768 Length=1303713 Score = 93.3 bits (102), Expect = 2e-13 Identities = 448/701 (64%), Gaps = 16/701 (2%) Strand=Plus/Plus Query 450913 AGCAATTGGAATTGATCTTGGAACCACCTTTTCATGTGTAGGTGTTTACCAAAATGGAAA 450972 ||| |||||||| || | ||||| |||| || || ||||| |||| |||||| || || Sbjct 223176 AGCTATTGGAATCGACTTGGGAACTACCTACTCTTGCGTAGGGGTTTTCCAAAACGGCAA 223235 Query 450973 TGTAGAAATTATAGCAAATGACCAAGGATCAC-GAACTACTCCTTCATGGGTAAGTTTTA 451031 || || ||||| || || || ||||| | || |||| ||||| | || | || | Sbjct 223236 AGTGGAGATTATCGCCAACGATCAAGG-TAACAGAACAACTCCGAGTTACGTTGGCTTCA 223294 Query 451032 CGGATTCAGAAAGACTTTTAGGGCAAGCTGCTAAAT--CAATGGTAAATTCAAATGCCAA 451089 | || | || || | | || | || || ||| ||| || || ||| | | Sbjct 223295 CCGACACCGAGCGATTAGTCGGCGATGCAGCGAAAAACCAA--GTGGCTTTGAATCCAGA 223352 Query 451090 AAACACAGTATATGATGCTAAACGTTTAATTGGCCGTATGTATGATGATGATACTGTACA 451149 |||||| | | || || || | | || ||||| ||||| |||| |||||| || Sbjct 223353 GAACACAATCTTCGACGCCAAGAGGCTGATAGGCCGCCGATATGACGATGCTACTGTGCA 223412 Query 451150 AAAAGAGAAAAAATTCTTTTCTT--ATGATGTAGTAAATCAAAAAGGAAAGCCCTATATT 451207 || | ||| | | | | | ||| || | | | | || || || | || Sbjct 223413 GTCTGACATGAAACTGTGGCCATTCAAGAT-TA-TCAGTGACAACAACAAACCGAAGATC 223470 Query 451208 CAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAAATTTCATCTATGGTT 451267 ||||| | || || || || || ||||||||| | |||||||| || ||||| Sbjct 223471 CAAGTGGAGTACAAGGGCGAGCGCAAGACTTTTGCTGCCGAAGAAATCAGCTCCATGGTA 223530 Query 451268 CTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCAGTTACTGATGCAGTA 451327 || || ||||| |||||||| ||| || | || ||| || ||||| Sbjct 223531 CTGGGCAAGATGAAGGAAACAGCCGAAGCCTACCTCGGACAAAAAGTCACCAGCGCAGTG 223590 Query 451328 ATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAACTAAAGATGCAGGACAT 451387 ||||| || || || || || || || | || |||||||||| ||||||||||| Sbjct 223591 ATTACAGTCCCTGCATACTTTAACGACTCCCAGAGGCAAGCAACGAAAGATGCAGGGACC 223650 Query 451388 ATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGCAGCTGCTCTAGCATAT 451447 ||||| || | || || | || | |||||||| || || || || ||||| || ||| Sbjct 223651 ATTGCCGGACTGAACGTGTTGAGAGTAATTAATGAGCCGACTGCCGCAGCTCTGGCTTAT 223710 Query 451448 GGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGTATTTGATTTTGGTGGA 451507 || || ||| || | | | ||||| ||| | | |||||||| | || || Sbjct 223711 GG-CTTGGATAA--GAGCCTGTCTGGGGAAAAGAATGTGCTTATATTTGATCTGGGAGGC 223767 Query 451508 GGAACTCATGATACTTCTGTACTTTCAATTGAAGATGG---GGTATTTGAAGTAAAGGCA 451564 || ||| |||| || | || | ||||| ||||| | ||||| || || || Sbjct 223768 GGCACTTTTGATGTGTCCATTCTCACTATTGACGATGGCTCACTGTTTGAGGTGAAATCA 223827 Query 451565 ACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAA 451605 || || || |||||||| || || ||||| |||| || Sbjct 223828 ACTGCAGGAGACACTCATCTTGGTGGAGAAGACTTTGACAA 223868 >seq10493 Length=264610 Score = 91.5 bits (100), Expect = 6e-13 Identities = 164/240 (68%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || ||||| || || || ||| | || |||||| || Sbjct 50422 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50481 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | | ||| || || ||||| || || || || || || || || Sbjct 50482 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50541 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| | || || ||||||||||| || | || || || || || Sbjct 50542 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50601 Query 391229 TATTGATAAGGATGCAACACTTCACTTAGTATTAAGACTGAGAGGATAAATACAtttttt 391288 || | ||||| | |||||||| | || || | ||||||||| ||| || |||| Sbjct 50602 CATCCAGAAGGAGTCCACACTTCATCTGGTTCTACGTCTGAGAGGAGGAATGCAGATTTT 50661 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| || || || ||||| || || || ||| | || |||||| || Sbjct 49510 AATGCAGATTTTCGTCAAGACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 49569 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | | ||| || || ||||| || || || || || || || || Sbjct 49570 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 49629 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| | || || ||||||||||| ||| | || || || || || Sbjct 49630 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGACGCACACTGAGTGACTACAA 49689 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | ||||| | |||||||| Sbjct 49690 CATCCAGAAGGAGTCCACACTTCA 49713 Score = 84.2 bits (92), Expect = 9e-11 Identities = 141/204 (69%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 391049 AATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATC 391108 |||| | |||||||| ||||| || ||||| || || || ||| | || |||||| || Sbjct 50194 AATGCAGATTTTCGTCAAAACTCTCACTGGAAAGACCATCACTTTGGAAGTTGAACCAAG 50253 Query 391109 TGATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCA 391168 ||| | ||||| | | ||| || || ||||| || || || || || || || || Sbjct 50254 TGACACAATTGAGAATGTGAAAGCCAAGATCCAAGACAAAGAGGGTATCCCACCAGACCA 50313 Query 391169 ACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAA 391228 ||| | || || ||| | || || ||||||||||| || | || || || || || Sbjct 50314 GCAAAGGTTGATCTTCGCCGGCAAGCAACTTGAAGACGGTCGCACACTGAGCGACTACAA 50373 Query 391229 TATTGATAAGGATGCAACACTTCA 391252 || | ||||| | |||||||| Sbjct 50374 CATCCAGAAGGAGTCCACACTTCA 50397 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975444908710832